Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq37 102 1e-16 >seq37 Length=1179958 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || |||||||| || ||| | || || |||| | || Sbjct 896141 TGCAGATTTTCGTCAAAACCCTGACGGGAAAAACCATCACTCTGGAAGTTGAACCAAGCG 896082 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | | ||| |||| || || | || || || ||||||||||| || |||||||| | Sbjct 896081 ACTCCATTGAAAACGTGAAGACAAAGATTCAGGACAAAGAAGGCATCCCGCCCGATCAGC 896022 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | ||||| || || || ||||| || ||| ||||| | | || || |||| Sbjct 896021 AGCGGTTGATTTTCGCCGGGAAGCAATTGGAAGATGGCCGAACGCTGAGCGACTACAATA 895962 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| |||||||| | ||| |||| || || ||| | || || Sbjct 895961 TTCAAAAGGAATCGACACTTCATCTAGTTTTGCGTTTACGTGGCGG 895916 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | ||||||||||| || || |||| || || | | | Sbjct 895913 TGCAGATTTTCGTAAAAACCCTGACAGGAAAAACCATCACGCTTGAAGTCGAGCCGAGTG 895854 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| |||| || || | || || ||| |||||||| ||||| ||||| |||| Sbjct 895853 ACTCTATTGAAAACGTGAAGACAAAGATCCAAGACAAAGAAGGTATTCCTCCCGACCAAC 895794 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||| || || || || ||| | || ||| |||| | | |||||||| | Sbjct 895793 AGCGTCTCATCTTCGCCGGAAAGCAACTCGAAGATGGCCGAACCCTGAGCGATTATAACA 895734 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 895733 TCCAGAAAGAATCCAC 895718 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | ||||||||||| || ||| |||| || |||| | || Sbjct 896369 TGCAGATCTTCGTGAAGACGCTTACAGGAAAAACCATCACTCTTGAGGTTGAACCAAGCG 896310 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | | ||| | ||||| || | || || || |||||||| || || ||||| |||| Sbjct 896309 ACAGTATCGAGAATGTTAAGACAAAGATTCAGGACAAAGAAGGTATCCCTCCCGACCAAC 896250 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||| || || || ||||| || || | || || | || || || | Sbjct 896249 AGCGATTAATTTTCGCTGGCAAGCAATTGGAAGACGGCCGTACCTTGAGCGACTACAACA 896190 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || ||||| ||||| | ||| |||| | || || ||||| || Sbjct 896189 TCCAGAAAGAGTCGACCCTTCATCTAGTCCTTCGTTTGAGAGGTGG 896144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786142608639320