Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq37 131 1e-25 >seq37 Length=1179958 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || |||||||| ||||||||||||| | | || | |||||| Sbjct 895249 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCG 895308 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| |||||| |||| || | ||| ||||| || || | ||||||||||| Sbjct 895309 AGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCTGGTGGGATTCCCTCTTTATCTTGA 895368 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||||| | | || | | ||| ||| ||| ||||| || || || | ||| Sbjct 895369 ATCTTTGTTTTCACGTTCTCGATGGAGTCGCTGGGTTCCACTTCCAGGGTAATGGTTTTT 895428 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || || || |||||||||||| Sbjct 895429 CCAGTCAATGTCTTGACGAAGATTTGCATA 895458 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || || || ||||| || | ||| | || || || ||||||||||||||||||| Sbjct 895914 TGCCGCCACGTAAACGCAAAACTAGATGAAGTGTCGATTCCTTTTGAATATTGTAGTCGC 895973 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | || | ||||| | || || |||||| |||| | ||||| ||||| |||| Sbjct 895974 TCAGCGTTCGGCCATCTTCCAATTGCTTCCCGGCGAAAATCAACCGCTGCTGATCGGGCG 896033 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || ||||| || ||||| | |||| | |||| | | ||| | | ||||| Sbjct 896034 GGATGCCTTCTTTGTCCTGAATCTTTGTCTTCACGTTTTCAATGGAGTCGCTTGGTTCAA 896093 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| ||||| || | ||| |||||||| ||||| || || || ||||| Sbjct 896094 CTTCCAGAGTGATGGTTTTTCCCGTCAGGGTTTTGACGAAAATCTGCAT 896142 Score = 127 bits (140), Expect = 2e-24 Identities = 155/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || |||||||| ||||||||||||| | | || | |||||| Sbjct 895477 ACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCG 895536 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || ||||| |||||| |||| || | ||| ||||| || || | || ||||| || | Sbjct 895537 AGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCAGGTGGGATTCCTTCTTTGTCTTGG 895596 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||||| | || | | ||| | | ||||||||| ||||| || | ||| Sbjct 895597 ATCTTCGTTTTCACATTCTCGATGGAGTCGCTTGGTTCAACTTCGAGAGTGATGGTTTTT 895656 Query 27219 CCCGTCAGAGTTTTCAC-AAAGATTTGCAT 27247 || ||||| |||||||| ||| || ||||| Sbjct 895657 CCGGTCAGGGTTTTCACAAAAAATCTGCAT 895686 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||| || | || || ||||| || || || || ||||||| | | || | Sbjct 895700 CGCAACACCAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATCGCTCAGGGTTCGGCCA 895759 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 |||||||| || || |||||| | |||||||||||||| || || || | ||| ||||| Sbjct 895760 TCTTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGGAGGAATACCTTCTTTG 895819 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| | |||| | |||| | || ||| | | || ||||| || || || Sbjct 895820 TCTTGGATCTTTGTCTTCACGTTTTCAATAGAGTCACTCGGCTCGACTTCAAGCGTGATG 895879 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || ||||| ||||| || || || ||||| Sbjct 895880 GTTTTTCCTGTCAGGGTTTTTACGAAAATCTGCAT 895914 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| ||||| || | ||| | ||||| || |||||||| ||||| |||||| Sbjct 895003 CCACCGCGCAGACGCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCGCTC 895062 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| | ||| || || ||| |||| || | ||| ||||| || || Sbjct 895063 AAGGTACGGCCATCTTCCAACTGCTTTCCTGCGAAAATAAGCCTCTGCTGATCTGGTGGG 895122 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || || ||| |||||| | || | | ||| ||| ||| ||| Sbjct 895123 ATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTCTCGATGGAGTCGCTGGGTTCCACT 895182 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || |||| || || || |||||||||||| Sbjct 895183 TCCAGCGTAATGGTCTTCCCAGTCAAGGTCTTGACGAAGATTTGCATA 895230 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||||||||||| | | || ||||||| | || || || Sbjct 896174 GTCGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCTTCCAATTGCTTGCCA 896233 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| | |||||||| || || || | ||| ||||| || ||||| | || Sbjct 896234 GCGAAAATTAATCGCTGTTGGTCGGGAGGGATACCTTCTTTGTCCTGAATCTTTGTCTTA 896293 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | | |||| | | |||||| || ||||| || | ||| || || || || Sbjct 896294 ACATTCTCGATACTGTCGCTTGGTTCAACCTCAAGAGTGATGGTTTTTCCTGTAAGCGTC 896353 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 896354 TTCACGAAGATCTGCAT 896370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921861912152