Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq293 86.0 8e-12 >seq293 Length=468840 Score = 86.0 bits (94), Expect = 8e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 179931 TGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACG 179990 |||||||||||| || || | || ||||| || || ||||| || || ||||| Sbjct 431202 TGAAGCATCTCGCACGTTCAGAAGTTTGCCACGAAGTGGAAACACTCCATAATGATCCTT 431261 Query 179991 ACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGAT 180050 ||||||||| | ||| || || | |||||| || ||||| ||||| |||| ||| Sbjct 431262 GCCAACCACACTCAAGCCACTGACAGCCAAGGTCTTGGCTGAATCTCCCTCTGTCAGGAT 431321 Query 180051 GAGCGTACACTTTCCAGA-TTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAA 180109 ||| ||||||| | || ||| | | ||| || | || || || || | ||||||| Sbjct 431322 GAGAGTACACTGACTTGAGTTGCGGC-CCCCAGCATCATTGGCATCATCAAGTTTGGGAA 431380 Query 180110 TACCAGTAATTTTG 180123 ||||| ||||||| Sbjct 431381 TACCACGAATTTTG 431394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618416484604760