Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq283 122 1e-22 >seq283 Length=477172 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 |||| || || || ||||| || || || ||||| |||| | ||||| |||||||| | Sbjct 155886 TCAAGGTTTCATAAATACCATCAATGCTATCATCTGACATGGTCAGAAGGAAACAGCTTG 155945 Query 78382 ACATTTGATGAT-GAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 ||| ||| | | | || ||||| | |||||| | || || || ||||| || |||||| Sbjct 155946 ACAATTGCGGTTTGCAC-GTTCCAGAATTAAACAGAGTAGGCGAAGCATGAGTGAACCAT 156004 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 || || || | || || || || ||||| || | || ||||| ||||||||||| Sbjct 156005 TTCTCTGACATCAGGTTATAAGTCTCAATGGCCGCTTTGATGTCATGATGATGAATTCCC 156064 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCA 78536 || | |||||||||||||| || || |||| |||| Sbjct 156065 ACTGAGACACGCATCAACATGTGTTGGGGTCGTTCA 156100 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| |||||||||||||||||| | ||| | || | || || Sbjct 150036 TCCAGCCATAGAAGTGCATGCTTGTCAGTTTGTGGTTGTCAGGTTGAGCAAAGAAAACAT 150095 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | ||||| || || || || || |||||||| ||||| ||||| | ||| | |||| Sbjct 150096 TGAAGGACTGGCTCTGGTCAATAAAGGCTCCTCTGTCAGCAGCCATATCTATGAGAGTCT 150155 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 |||| | |||||||||| || ||| | | | |||| | ||||||||||| Sbjct 150156 TTTGTGAGATTTCCCAAACTGTCTTGTACAGTGGTTTAAGATCATCTGGAA 150206 Score = 96.9 bits (106), Expect = 5e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 78060 TGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCAT 78119 ||||| || || ||||| || || || | || || || || | |||||| |||||| Sbjct 155176 TGTTCCTCTTTGCCTGTGTTTTTCTTCAAGTCCAGGAAATCAAAGATATCACTGTGCCAT 155235 Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||||| || || || || | | |||||||| || || |||||||| || | ||||| Sbjct 155236 GGTTCCAGGTAAATAGCAAATGCACCAGGTCGCTTGTTTCCTCCCTGGTCCACGTATCTT 155295 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 || || ||| ||||| | |||||| || |||| ||| || || |||||||| || Sbjct 155296 GCAGTTGCATTGTAAACACGCAACATGGGGATAAGACCATTCGAAGTTCCATTGGT 155351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694647777585440