Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq37 113 3e-20 >seq37 Length=1179958 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG- 44168 ||| || | ||| | |||||| || ||||| || ||||||||| |||||||||||| Sbjct 895002 TCCACCGCGCAGACGCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCGCT 895061 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || | || | || |||| |||||| || || || || | | ||||||||||| | Sbjct 895062 CAAGGTACGGC-CATCTTCCAACTGCTTTCCTGCGAAAATAAGCCTCTGCTGATCTGGTG 895120 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | || ||||| || || || |||| | | |||| |||| || ||||| Sbjct 895121 GGATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTCTCGATGGAGTCGCTGGGTTCCA 895180 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| |||||| ||||| || || | |||||| |||||||||||||| Sbjct 895181 CTTCCAGCGTAATGGTCTTCCCAGTCAAGGTCTTGACGAAGATTTGCAT 895229 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||||||| | | |||| |||||| ||| |||||||| |||||||| Sbjct 895224 TTGCATACCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTA 895283 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || | || || || || || ||||| || |||| | ||||||||| Sbjct 895284 GTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATC 895343 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | || || || || ||||| || || | |||| | |||| |||| || Sbjct 895344 TGGTGGGATTCCCTCTTTATCTTGAATCTT-TGTTTTCACGTTCTCGATGGAGTCGCTGG 895402 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| |||| ||||| || ||||| || | ||||| |||||||||||||| Sbjct 895403 GTTCCACTTCCAGGGTAATGGTTTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 895457 Score = 102 bits (112), Expect = 6e-17 Identities = 168/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||||| | | || || ||||| || ||| || ||||||||||| || Sbjct 896140 CATTCCACCTCTCAAACGAAGGACTAGATGAAGGGTCGACTCTTTCTGGATGTTGTAGTC 896199 Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | | || | || |||| |||| ||||| || || || || || ||||| || || | Sbjct 896200 GCTCAAGGTACGGC-CGTCTTCCAATTGCTTGCCAGCGAAAATTAATCGCTGTTGGTCGG 896258 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | |||||| || ||| ||||| ||| || ||| | || ||||| | | Sbjct 896259 GAGGGATACCTTCTTTGTCCTGAATCTTTGTCTT-AACATTCTCGATACTGTCGCTTGGT 896317 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || ||||| | || || || ||||| || || |||||||||||||| ||||||||| Sbjct 896318 TCAACCTCAAGAGTGATGGTTTTTCCTGTAAGCGTCTTCACGAAGATCTGCATGATG 896374 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| || || ||||| || |||||||| || ||||| ||| || || | || Sbjct 895930 CAAAACTAGATGAAGTGTCGATTCCTTTTGAATATTGTAGTCGCTCAGCGTTCGGCCATC 895989 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| ||||||||||| || ||||| ||||||||||| | || | ||||| || || Sbjct 895990 TTCCAATTGCTTCCCGGCGAAAATCAACCGCTGCTGATCGGGCGGGATGCCTTCTTTGTC 896049 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||||| || | |||| |||| | ||| || |||| || || || Sbjct 896050 CTGAATCTTTGTCTTCACGTTTTCAATGGAGTCGCTTGGTTCAACTTCCAGAGTGATGGT 896109 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| || ||||| || ||||| Sbjct 896110 TTTTCCCGTCAGGGTTTTGACGAAAATCTGCAT 896142 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | ||||||||||||||| ||| || || |||||||| ||||| Sbjct 895684 CATTCCACCACGAAGACGCAACACCAGGTGAAGGGTGGATTCTTTCTGGATGTTATAATC 895743 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || || || ||||| ||||| ||||| | |||||| || || | Sbjct 895744 GCTCAGGGTTCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCGGG 895803 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||| || || ||||| ||||| || | || | ||| | || Sbjct 895804 AGGAATACCTTCTTTGTCTTGGATCTTTGTCTTCACGTTTTCAATAGAGTCACTCGGCTC 895863 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||| || || ||||| || ||||| || ||||| || |||||| Sbjct 895864 GACTTCAAGCGTGATGGTTTTTCCTGTCAGGGTTTTTACGAAAATCTGCATG 895915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979778145757