Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq276 98.7 2e-15 seq176 98.7 2e-15 seq76 98.7 2e-15 seq8 98.7 2e-15 seq827 96.9 7e-15 seq218 87.8 4e-12 seq165 87.8 4e-12 seq397 86.0 1e-11 seq175 86.0 1e-11 >seq276 Length=227470 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||| Sbjct 66904 TTTATCAAGCATCAACATCGGAATTGTATGGAAAAGTTCAGGAAATTCCTCAAAGTGAAA 66845 Query 61144 GGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 || || ||||||||||| || |||||| Sbjct 66844 CAACACCATTTTATCCTCGATCACCTTATGGT 66813 >seq176 Length=322550 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 61363 TAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGT 61422 |||| || ||| | ||||||||| |||| |||||||||||| || ||||||||||||| Sbjct 207609 TAGATTCCAAACGTGATTGGGGACATGCTCGAGATTATATCGAAGCAATGTGGTTGATGT 207668 Query 61423 TGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTG 61482 | ||||| ||||| || || || | ||||||||| || || | || ||||| || | Sbjct 207669 TACAACATGATACACCTGAAGATTTCGTTATTGCCACAGGTGAAACACATAGTGTTCGAG 207728 Query 61483 AATTCGT 61489 |||| || Sbjct 207729 AATTTGT 207735 Score = 95.1 bits (104), Expect = 3e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| | | ||||||||||||||| ||||| || || |||||||||||||||||||||| Sbjct 207192 TCGATTCTATCAAGCATCAACATCAGAACTTTACGGTAAAGTTCAAGAAATTCCTCAAAG 207251 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 |||| || || || |||||||| ||||||||| Sbjct 207252 TGAAACAACACCATTCTATCCTCGATCACCGTATGGT 207288 >seq76 Length=478225 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||| Sbjct 146540 TTTATCAAGCATCAACATCGGAATTGTATGGAAAAGTTCAGGAAATTCCTCAAAGTGAAA 146481 Query 61144 GGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 || || ||||||||||| || |||||| Sbjct 146480 CAACACCATTTTATCCTCGATCACCTTATGGT 146449 >seq8 Length=956989 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 61363 TAGACTCTAAAAGAGATTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGT 61422 |||| || ||| | ||||||||| |||| |||||||||||| || ||||||||||||| Sbjct 309062 TAGATTCCAAACGTGATTGGGGACATGCTCGAGATTATATCGAAGCAATGTGGTTGATGT 309121 Query 61423 TGCAACAAGATACTCCAGATGACTACGTTATTGCGACTGGACAGACGACGAGTGTCCGTG 61482 | ||||| ||||| || || || | ||||||||| || || | || ||||| || | Sbjct 309122 TACAACATGATACACCTGAAGATTTCGTTATTGCCACAGGTGAAACACATAGTGTTCGAG 309181 Query 61483 AATTCGT 61489 |||| || Sbjct 309182 AATTTGT 309188 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| | | ||||||||||||||| ||||| || || |||||||||||||||||||||| Sbjct 308646 TCGATTCTATCAAGCATCAACATCAGAACTTTACGGTAAAGTTCAAGAAATTCCTCAAAG 308705 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGT 61175 |||| || || || |||||||| || |||||| Sbjct 308706 TGAAACAACACCATTCTATCCTCGATCACCCTATGGT 308742 >seq827 Length=48416 Score = 96.9 bits (106), Expect = 7e-15 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 61073 GAACTCTCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCC 61132 |||| ||| ||| |||||||||||||| |||||||||||||||||||| ||| |||| Sbjct 19744 GAACATTCGGTTTTACCAAGCATCAACATCAGAACTGTATGGAAAAGTTCAGGAATTTCC 19803 Query 61133 TCAAACAGAAAGGACTCCGTTTTATCCTCGT 61163 ||||| ||||| ||||| || ||||| ||| Sbjct 19804 TCAAAACGAAAGTACTCCCTTCTATCCCCGT 19834 >seq218 Length=275576 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 84585 TGCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGAC 84526 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 84525 CCCCACGTTGGGC 84513 >seq165 Length=331862 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 283739 TGCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGAC 283680 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 283679 CCCCACGTTGGGC 283667 >seq397 Length=163567 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| | Sbjct 144674 GCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGACC 144615 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 144614 CCCACGTTGGGC 144603 >seq175 Length=323105 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||| | Sbjct 248229 GCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGACC 248288 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 248289 CCCACGTTGGGC 248300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057333815267210