Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq1298 609 9e-170 >seq1298 Length=11968 Score = 609 bits (674), Expect = 9e-170 Identities = 379/407 (93%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 10904 CCAAACGTCTCTTCAGGCCATTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 10963 |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct 9965 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 10024 Query 10964 TTGCATGGGATCATTGGATATTGCGGGTTTAGTGGTTGTAGAAACACCTGACCGCTATCC 11023 ||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| Sbjct 10025 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 10084 Query 11024 CTGATCAGTTTCTTGAAGGTAAATTCATCACCACCAAGTCTGGCTATGCAGAAATCGCCG 11083 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || Sbjct 10085 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 10144 Query 11084 GGCTCAACAGCTTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTG 11143 ||||||||||| |||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct 10145 GGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTG 10204 Query 11144 GAACCTGTTGGTGCGGTCATTGAGTTACCTTCAACCTCAAGCCAGAATGCAGAGTCACTG 11203 || ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct 10205 GAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 10264 Query 11204 GCTTTTTTGGTTGTGCTTACCAATCTCTCCGCATCACCTTTGGTAAAGGTTCTGAGTTCT 11263 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | Sbjct 10265 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTA 10324 Query 11264 GGAGAGAACATCCCAGCCTGAACATGAGAAAAAACAGGGTACTCATA 11310 || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 10325 GGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATA 10371 Score = 145 bits (160), Expect = 3e-30 Identities = 105/120 (88%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 9460 GAGAGATCAGAATTGCGTTGTTTAGTGAGTTGTATCTATTTATTTTCCAATAAATACAAT 9519 |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 8442 GAGAGATCTGAATTGCTATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAAT 8501 Query 9520 TGGTTATGTGtttttttGGGCGA----GAGGAAAAGAAAACCCGGCATGGAGGCCGGGTT 9575 |||||||||| |||| |||||| |||| |||||||||||||| ||||||||||| Sbjct 8502 TGGTTATGTG-TTTTGGGGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 8560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194809096831216