Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq417 168 7e-37 seq83 159 4e-34 seq27 98.7 1e-15 seq91 95.1 1e-14 >seq417 Length=153455 Score = 168 bits (186), Expect = 7e-37 Identities = 228/315 (72%), Gaps = 2/315 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| || |||| || |||||||| || || || || || || || || ||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| || || || ||||| | |||||||||||| || | ||| |||| ||| | Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||| || || || || || || || ||||| ||||| | ||| || || |||||| Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 17414 TTTTCGTCCGGTGTAAGAACG-CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 | ||| || || || | |||| ||| || | | ||| |||| || ||| |||||||| Sbjct 94965 TGTTCATCGGGAGTTA-AACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTC 95023 Query 17473 GGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTAT 17532 ||||||| | |||| ||| |||||| | ||||| ||||||| |||| ||| Sbjct 95024 ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTAT 95083 Query 17533 GGGGAATACAACATA 17547 || |||| |||||| Sbjct 95084 TGGAAATAGAACATA 95098 >seq83 Length=472686 Score = 159 bits (176), Expect = 4e-34 Identities = 226/315 (72%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||| || |||| || |||||||| || || || || || || || || ||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 ||||| || || || || ||||| | |||||||||||| || | ||| |||| ||| | Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||| || || || || || || || ||||| || || | ||| || || |||||| Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 17414 TTTTCGTCCGGTGTAAGAACG-CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 | ||| || || || | |||| ||| || | | ||| |||| || ||| |||||||| Sbjct 432602 TGTTCATCGGGAGTTA-AACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTC 432544 Query 17473 GGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTAT 17532 ||||||| | |||| ||| |||||| | ||||| ||||||| |||| ||| Sbjct 432543 ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTAT 432484 Query 17533 GGGGAATACAACATA 17547 || |||| |||||| Sbjct 432483 TGGAAATAGAACATA 432469 >seq27 Length=690661 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/211 (72%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 119860 TCCCACGTATCCGTTGGGATCCGTTCCATCTA-ACTCGTATTTATCGTTTAAGTAGATAC 119918 ||| || || || || ||||| ||||| | ||| ||||||||| |||||||||||| Sbjct 224126 TCCAACATAACCATTTGGATCACGGCCATCGAGACT-GTATTTATCATTTAAGTAGATAG 224184 Query 119919 AGACGCTTAACGCACTT--TCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTA 119976 | || | ||| || || | | ||||||| || ||||| || ||||| || Sbjct 224185 CAAT--TTCAATTGCTTCGTCTGGTGATTTTGTCCATTCGAGAATTTTCTTTGCCCAATA 224242 Query 119977 CATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCA 120036 ||| || | ||||||||||||||||||| || |||||||| ||||| || ||||| Sbjct 224243 CATTCGAAGAAATCCATGCATTTTACCTTCTTTAATCATTTGAATTTGTGATGCATTCCA 224302 Query 120037 TAAGGGATCGTGTGTACGGGCGTGTTCTAAA 120067 ||| ||||| || || || | ||||||| Sbjct 224303 TAATTTATCGTAAGTTCGAGCATATTCTAAA 224333 >seq91 Length=455798 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 119860 TCCCACGTATCCGTTGGGATCCGTTCCATCTA-ACTCGTATTTATCGTTTAAGTAGATAC 119918 ||| || || || || ||||| |||||| | ||| ||||||||| |||||||||||| Sbjct 56610 TCCTACATAACCATTTGGATCACGTCCATCGAGACT-GTATTTATCATTTAAGTAGATAG 56552 Query 119919 AGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACA 119978 | | || ||| || | | ||||||| || ||||| || ||||| |||| Sbjct 56551 CAATTTCAATTGCTTCTTCCGGTGATTTTGTCCATTCGAGAATTTTCTTTGCCCAATACA 56492 Query 119979 TACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATA 120038 | || | ||||||||||||||||||| || ||||||| ||||| || ||||||| Sbjct 56491 TTCGAAGAAATCCATGCATTTTACCTTCTTTAATCATTTGATTTTGTGATGCATTCCATA 56432 Query 120039 AGGGATCGTGTGTACGGGCGTGTTCTAAA 120067 | ||| | || || || | ||||||| Sbjct 56431 ATTTATCATAAGTTCGAGCATATTCTAAA 56403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517311624103560