Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq417 192 6e-44 seq83 192 6e-44 seq163 87.8 2e-12 seq91 86.0 6e-12 seq27 84.2 2e-11 >seq417 Length=153455 Score = 192 bits (212), Expect = 6e-44 Identities = 229/308 (74%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || |||||||| |||||||| ||||||||||| || || || || || || || ||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||| ||||| || || || || | |||||| ||||| || ||||| |||| | | Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||| || ||||| ||||||||||||||||| ||||| | || || || |||||| Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 | ||| || | || | | ||||||| | | ||| |||| || ||| |||||||| Sbjct 94965 TGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCA 95024 Query 16712 GGCGTCCAAA-AGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT 16770 ||||||| || | |||| ||| |||||| | |||||| ||||||| |||| ||| Sbjct 95025 CATGTCCAAATAGAT-GCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTAT 95083 Query 16771 GGGAAATA 16778 ||||||| Sbjct 95084 TGGAAATA 95091 >seq83 Length=472686 Score = 192 bits (212), Expect = 6e-44 Identities = 229/308 (74%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || |||||||| |||||||| ||||||||||| || || || || || || || ||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||||||||| || || || || | |||||| ||||| || ||||| |||| | | Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||| || ||||| ||||||||||||||||| || || | || || || |||||| Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 | ||| || | || | | ||||||| | | ||| |||| || ||| |||||||| Sbjct 432602 TGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCA 432543 Query 16712 GGCGTCCAAA-AGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTAT 16770 ||||||| || | |||| ||| |||||| | |||||| ||||||| |||| ||| Sbjct 432542 CATGTCCAAATAGAT-GCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTAT 432484 Query 16771 GGGAAATA 16778 ||||||| Sbjct 432483 TGGAAATA 432476 >seq163 Length=332407 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||||||||||| |||||| |||||||| || || || || || || ||||| ||| Sbjct 173315 ATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGCTATTTGA 173256 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569 || |||||||| || || || || | || ||| ||||| Sbjct 173255 AAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTC 173218 >seq91 Length=455798 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 119013 TCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTTATCGTTTAAGTAGATAC 119071 ||| || || || || ||||| ||| || | ||| ||| ||||| |||||||||||| Sbjct 56610 TCCTACATAACCATTTGGATCACGTCCATCGAGACT-GTATTTATCATTTAAGTAGATAG 56552 Query 119072 AGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACA 119131 | | || |||||| | || ||||||| || ||||| || ||||| |||| Sbjct 56551 CAATTTCAATTGCTTCTTCCGGTGATTTTGTCCATTCGAGAATTTTCTTTGCCCAATACA 56492 Query 119132 TACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATA 119191 | || | | | || ||||||||||| || |||||||| ||| ||||| | ||||||| Sbjct 56491 TTCGAAGAAATCCATGCATTTTACCTTCTTTAATCATTTGATTTTGTGATGCATTCCATA 56432 Query 119192 GAGGATCGTGTGTACGGGCGTGTTCTAAA 119220 ||| | || || || | ||||||| Sbjct 56431 ATTTATCATAAGTTCGAGCATATTCTAAA 56403 >seq27 Length=690661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 119102 TCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGT 119161 ||||||| || ||||| || ||||| ||||| || | | | || ||||||||||| || | Sbjct 224215 TCCATTCGAGAATTTTCTTTGCCCAATACATTCGAAGAAATCCATGCATTTTACCTTCTT 224274 Query 119162 TAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACGGGCGTGTTCTAAA 119220 ||||||| |||| ||||| | ||||||| ||||| || || || | ||||||| Sbjct 224275 TAATCATTTGAATTTGTGATGCATTCCATAATTTATCGTAAGTTCGAGCATATTCTAAA 224333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511183195942440