Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq62 100 2e-16 seq39 95.1 9e-15 >seq62 Length=528316 Score = 100 bits (110), Expect = 2e-16 Identities = 279/417 (67%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| |||||||| |||||||||||| | ||| ||| || || ||| | | || Sbjct 419680 TTATACAGCCATTTGCATTTTAATTGGTCCATATGGTAAATAATTATCCAATTTGAAATC 419621 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAA--ACATTT-CTAGCAAATCTAAGTGTTGGAAA 101649 ||| ||||||| ||||| || |||| || ||| || ||| | | | ||||||||| Sbjct 419620 ATCAACTTTAAAATCATCGAT---TGAAGTACGTTTATTAACAATTGTTAATGTTGGAAA 419564 Query 101650 CGGTCTAGGAGTTCGCG-TCAACTGCATTTTAAG---AGCATCAATGTGATCTACATAGA 101705 | || | |||| || |||| | || ||| || ||||| |||| | || | Sbjct 419563 TGTTC--GTGGTTCACGTTCAATT--TGTTCAAGTAAAGGTTCAATATGATTAAGGTAAA 419508 Query 101706 TGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAA 101765 || ||||| || |||| || ||||| || || || || |||| ||||| |||| Sbjct 419507 CATGTGCATCACCCATAGAATAAATAAAATCACCTGGTGTTAAATTACATACATGTGCAA 419448 Query 101766 TCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAG 101825 |||| |||| | | |||||| ||||| || ||||| || || | || | |||| Sbjct 419447 TCATATAAGTAAGTAAAGAATACGATGCAATATTGAATGGTACACCAAGACCTAAATCAC 419388 Query 101826 CTGATCTTTGATACAGTTGACAGG--AAAGCTTTCCATCA-CAGACATAAAATTGACTTA 101882 ||| | |||| ||| ||| | || | ||| || | | |||| |||||||| || Sbjct 419387 ATGAACGTTGAAACATCAAACAAGATAATTCATTCGATGATGAAACATTAAATTGACATA 419328 Query 101883 ATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGA--AACATTCCAAGCACA 101937 |||||||| || || | |||||| || || ||| ||||||||| ||||| Sbjct 419327 GAACATGACATGGTGGAAGTGCCATTTCAG--ATAATTGATTAACATTCCATGCACA 419273 >seq39 Length=615610 Score = 95.1 bits (104), Expect = 9e-15 Identities = 278/417 (67%), Gaps = 21/417 (5%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| |||||||| |||||||||||| | ||| ||| || || ||| | | || Sbjct 223063 TTATACAGCCATTTGCATTTTAATTGGTCCATATGGTAAATAATTATCCAATTTGAAATC 223004 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAA--ACATTT-CTAGCAAATCTAAGTGTTGGAAA 101649 ||| ||||||| ||||| || |||| | ||| || ||| | | | ||||||||| Sbjct 223003 ATCAACTTTAAAATCATCGAT---TGAAGTCCGTTTATTAACAATTGTTAATGTTGGAAA 222947 Query 101650 CGGTCTAGGAGTTCGCG-TCAACTGCATTTTAAG---AGCATCAATGTGATCTACATAGA 101705 | || | |||| || |||| | || ||| || ||||| |||| | || | Sbjct 222946 TGTTC--GTGGTTCACGTTCAATT--TGTTCAAGTAAAGGTTCAATATGATTAAGGTAAA 222891 Query 101706 TGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAA 101765 || ||||| || |||| || ||||| || || || || |||| ||||| |||| Sbjct 222890 CATGTGCATCACCCATAGAATAAATAAAATCACCTGGTGTTAAATTACATACATGTGCAA 222831 Query 101766 TCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAG 101825 |||| |||| | | |||||| ||||| || ||||| || || | || | |||| Sbjct 222830 TCATATAAGTAAGTAAAGAATACGATGCAATATTGAATGGTACACCAAGACCTAAATCAC 222771 Query 101826 CTGATCTTTGATACAGTTGACAGG--AAAGCTTTCCATCA-CAGACATAAAATTGACTTA 101882 ||| | |||| ||| ||| | || | ||| || | | |||| |||||||| || Sbjct 222770 ATGAACGTTGAAACATCAAACAAGATAATTCATTCGATGATGAAACATTAAATTGACATA 222711 Query 101883 ATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGA--AACATTCCAAGCACA 101937 |||||||| || || | |||||| || || ||| ||||||||| ||||| Sbjct 222710 GAACATGACATGGTGGAAGTGCCATTTCAG--ATAATTGATTAACATTCCATGCACA 222656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361091965776917