Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq417 230 3e-55 seq83 221 1e-52 seq15 125 8e-24 seq163 107 2e-18 >seq417 Length=153455 Score = 230 bits (254), Expect = 3e-55 Identities = 252/335 (75%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 |||||||||||||||||||| | || || | || || ||||| ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 24515 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 24574 ||||||||||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 24575 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 24634 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 24635 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 24694 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 24695 TTGAATTGGAAAAATAACAAATCTATTTGGATTTT 24729 || |||||||| | |||| | | |||||||| Sbjct 95078 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 95112 >seq83 Length=472686 Score = 221 bits (244), Expect = 1e-52 Identities = 250/335 (75%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||||||||| |||||||| | || || | || || ||||| ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 24515 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 24574 ||||||||||| || || || ||||| || |||||||| || || |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 24575 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 24634 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 24635 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 24694 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 24695 TTGAATTGGAAAAATAACAAATCTATTTGGATTTT 24729 || |||||||| | |||| | | |||||||| Sbjct 432489 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 432455 >seq15 Length=819560 Score = 125 bits (138), Expect = 8e-24 Identities = 368/564 (65%), Gaps = 5/564 (1%) Strand=Plus/Plus Query 53597 GGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCC 53656 ||||| | |||| ||| |||||||| || | || | || || || | |||| Sbjct 550420 GGATAGAAGTTAACATCAATAATTTTGTTCAAATTACGTACGATAACACTTGTTACATGA 550479 Query 53657 TTCAGTTTGAGAAAATCAAATTGTCCATCTATT---ACAAACATGTTCAATGCAATAGAT 53713 ||||| |||||||||| || |||| ||||| || | |||||| ||| Sbjct 550480 ACAAGTTTATCAAAATCAAATGTTCGATCTGGACGAACAAATCGATTAAGTGCAATTGAT 550539 Query 53714 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 53773 |||| ||||||||| || || ||||| | | | ||||| || || || || || | | Sbjct 550540 GCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAAA 550599 Query 53774 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 53833 || ||| | || || || | || |||||||||||| || |||||| ||| ||| Sbjct 550600 TTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTTA 550659 Query 53834 TAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACA 53893 || | |||||||| |||||||||||||| || | | | ||| || ||| | | Sbjct 550660 TATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATCT 550719 Query 53894 CGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 53952 | || || ||| || | | | | || || ||| ||| |||||| || ||| Sbjct 550720 TGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTTC 550778 Query 53953 AAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 54012 || || | |||||||||||| | || ||||| || |||||||| || | ||| Sbjct 550779 GAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGTCCA 550838 Query 54013 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 54072 | | ||| | | | || || |||||| | ||| |||||||| | |||| ||| || Sbjct 550839 TTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAAGCTGGAAAGAG 550898 Query 54073 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 54132 ||| | | | | ||| || || ||||| ||| ||| | ||| | | || Sbjct 550899 ATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAACTCAAAGAT 550958 Query 54133 ATCAGAATGCCACGGTTCCAAGTA 54156 ||| | |||||| |||||||| || Sbjct 550959 ATCCGCATGCCATGGTTCCAAATA 550982 Score = 118 bits (130), Expect = 1e-21 Identities = 324/493 (66%), Gaps = 5/493 (1%) Strand=Plus/Minus Query 53668 AAAATCAAATTGTCCATCTATT---ACAAACATGTTCAATGCAATAGATGCCAGATTACA 53724 |||||||||| || |||| ||||| || | |||||| ||||||| |||||| Sbjct 384342 AAAATCAAATGTTCGATCTGGACGAACAAATCGATTAAGTGCAATTGATGCCAAATTACA 384283 Query 53725 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 53784 ||| || || ||||| | | | ||||| || || || || || | ||| ||| | Sbjct 384282 AACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAAATTTGAACAATG 384223 Query 53785 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 53844 || || || | || |||||||||||| || |||||| ||| ||||| || ||||| Sbjct 384222 AATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTTATATAGCATGAA 384163 Query 53845 TGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT 53904 ||| |||||||||||||| || | | | ||| || ||| | | | || || || Sbjct 384162 TGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATCTTGTGCTTTAAT 384103 Query 53905 TATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTC 53963 | || | | | | || || ||| ||| |||||| || ||| || || | || Sbjct 384102 TGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTTCGAATTCTTTTC 384044 Query 53964 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 54023 |||||||||| | || ||||| || |||||||| || | ||| | | ||| | Sbjct 384043 CCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGTCCATTTTTCGTTAG 383984 Query 54024 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 54083 | | || || |||||| | ||| |||||||| | ||| ||| ||||| | | | Sbjct 383983 CTTCAACACGACGCATAAATAAATCCGGAATCCATAAGGCTGGAAAGAGATCACGAGCAC 383924 Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143 | ||| || || ||||| ||| ||| | || | | ||||| | ||||| Sbjct 383923 GTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAATTCAAAGATATCCGCATGCC 383864 Query 54144 ACGGTTCCAAGTA 54156 | |||||||| || Sbjct 383863 ATGGTTCCAAATA 383851 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 53269 ACTATTTCTAAGACCGTAT 53287 |||||| | | ||| ||| Sbjct 384869 ACTATTACGAGTACCATAT 384851 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 53269 ACTATTTCTAAGACCGTAT 53287 |||||| | | ||| ||| Sbjct 549964 ACTATTACGAGTACCATAT 549982 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 || || ||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 54548 TGCTGAGGTCTTTCAACGAT 54567 || || |||| |||||| || Sbjct 383234 TGTTGTGGTCGTTCAACAAT 383215 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/189 (70%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 || ||| |||||| || ||||| || | ||| |||| ||||||||| || | |||| Sbjct 550142 GAACCTGGATATGTTTCATATGGACCATTAATCTTAGCTGATTCACAACTTGCTTTTAAT 550201 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 ||| | |||||||| |||||||| || | ||| || | ||| ||||| || || Sbjct 550202 GCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTCG 550261 Query 53501 AATGGATA----ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 53556 |||||| | || || ||||| | || || | ||||||||||||||||| || Sbjct 550262 AATGGAAATCGCATCAAACAGAATGTA----TCAGCAAGACCTTGAACACCAATACCAAT 550317 Query 53557 AGGTCTATG 53565 || | ||| Sbjct 550318 TGGACGATG 550326 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 || || ||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 54548 TGCTGAGGTCTTTCAACGAT 54567 || || |||| |||||| || Sbjct 551602 TGTTGTGGTCGTTCAACAAT 551621 >seq163 Length=332407 Score = 107 bits (118), Expect = 2e-18 Identities = 89/106 (84%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || ||||||||||| | ||||||||||||||||||||| |||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTC 24499 |||||||| || |||||||| | || || |||||| || ||||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAAT-TGAACTTC 173218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593453185886160