Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq106 102 7e-17 seq919 100 2e-16 seq6255 96.9 3e-15 seq140 95.1 1e-14 seq154 87.8 2e-12 seq428 84.2 2e-11 seq483 82.4 7e-11 >seq106 Length=426470 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| ||||| |||||||| || || |||| ||||| Sbjct 417166 ATGCAAATTTTCGTCAAAACCTTGACCGGCAAAACAATCACACTCGAAGTTGAACCTAGC 417107 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | ||||| |||||| || ||||||||| | || ||||||| Sbjct 417106 GATACAATTGAAAACGTTAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCAGATCAA 417047 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGA--TTCCAAAACTATGGCCGATTACA 29139 ||| | ||||||||||| || |||||||| ||||| || || ||| | || |||| Sbjct 417046 CAACGCCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACACTCAG--TGACTACA 416989 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||| || || || || || ||| | || | ||| | || || || Sbjct 416988 ATATTCAAAAAGAGTCAACACTCCACTTAGTTCTTCGACTTCGTGGTGG 416940 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| || || || ||||||||||| ||| ||||| Sbjct 417682 ATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACACTTGAAGTTGAACCAAGT 417623 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | ||||| |||||| || ||||||||| | || |||||| Sbjct 417622 GACACCATCGAAAACGTTAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCTGATCAA 417563 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | ||||| ||||| || |||||||| |||||| || | |||| | ||| || | Sbjct 417562 CAACGTCTTATTTTTGCCGGTAAACAACTCGAAGATGGTCGTACACTAAG--CGACTATA 417505 Query 29140 ATATTCAGAAGGAATCTACTCTTCA 29164 ||||||| || ||| ||| ||||| Sbjct 417504 ATATTCAAAAAGAAAGTACACTTCA 417480 >seq919 Length=36295 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||||||| | || |||||||| || ||| |||| ||||| | Sbjct 21435 ATGCAAATCTTCGTCAAAACACTTACTGGCAAAACAATCACCCTCGAAGTCGAACCATCC 21494 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| |||||| || || |||||| | || |||||| Sbjct 21495 GACACAATTGAAAACGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 21554 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGATTACA 29139 ||| | | |||||||| || |||||||| |||||| | || | ||| ||||||||| Sbjct 21555 CAACGTTTGATCTTTGCTGGTAAACAACTTGAAGATGGACGAACATTAT--CCGATTACA 21612 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||| || |||||||| || || || |||| Sbjct 21613 ATATCCAAAAGGAATCAACACTCCATTTGGT 21643 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 ||||||||| | |||||||||||| | || || |||||| || | || ||||| Sbjct 19203 AAGCAAAAA-TCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTTGCT 19261 Query 29100 GGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTA 29157 ||||||||| |||||||| || || | ||| |||| ||||| ||||| || ||||| | Sbjct 19262 GGCAAACAATTGGAAGATGGTCGAACATTAT--CCGACTACAACATTCAAAAAGAATCAA 19319 Query 29158 CTCTTCACATGGT 29170 | |||||| |||| Sbjct 19320 CACTTCACTTGGT 19332 >seq6255 Length=968 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 28957 TAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAAC 29016 |||| |||||||| ||| ||||||| | || || |||||||| || |||| ||||| Sbjct 120 TAAACATGCAAATTTTCGTCAAAACTCTCACCGGTAAAACCATCACTCTCGAAGTGGAAC 179 Query 29017 CCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAG 29076 | || || | | | | ||| || || ||||||||||| | || || Sbjct 180 CAAGTGATACTATCGAAAACGTCAAGGCCAAGATCCAAGATAAAGAAGGCATTCCACCAG 239 Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGA--TTCCAAAACTATGGCCGA 29134 |||||||| | ||||||||||| ||||||||||| ||||| || | | || | ||| Sbjct 240 ATCAACAACGCCTTATCTTTGCCGGCAAACAACTCGAAGACGGTCGCACATTAAG--CGA 297 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 || ||||| || |||||||| || ||||| |||| Sbjct 298 CTATAATATCCAAAAGGAATCAACACTTCATTTGGT 333 >seq140 Length=369268 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| || || || ||||||||||| ||| ||||| Sbjct 124673 ATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACACTTGAAGTTGAACCAAGT 124732 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | ||| |||||| || ||||||||| | || |||||| Sbjct 124733 GATACGATCGAAAACGTCAAGGCTAAAATTCAAGACAAAGAAGGTATCCCACCTGATCAA 124792 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | ||||| ||||| || |||||||| |||||| || | |||| | ||| || | Sbjct 124793 CAACGTCTTATTTTTGCCGGTAAACAACTCGAAGATGGTCGTACACTAAG--CGACTATA 124850 Query 29140 ATATTCAGAAGGAATCTACTCTTCA 29164 ||||||| || ||| ||| ||||| Sbjct 124851 ATATTCAAAAAGAAAGTACACTTCA 124875 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| |||||||||||||| || || ||| ||||| Sbjct 124901 ATGCAAATTTTCGTCAAAACCTTGACGGGCAAAACAATCACACTTGAAGTTGAACCAAGT 124960 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || ||||||||| | || |||||| Sbjct 124961 GATACCATCGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGATCAA 125020 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| ||||||||||||| || |||||| | |||||| || | ||| | || |||| Sbjct 125021 CAACGACTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACACTCAG--TGACTACA 125078 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 | || || || ||||| || ||||| | || | || ||||| || || Sbjct 125079 ACATCCAAAAAGAATCAACCCTTCATTTAGTACTTCGTTTACGTGGTGG 125127 >seq154 Length=348346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Plus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 ||||||||| | |||||||||||| | || || |||||| || | || ||||| Sbjct 148308 AAGCAAAAA-TCCAAGATAAAGAAGGTATTCCACCTGACCAACAACGATTAATTTTTGCT 148366 Query 29100 GGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTA 29157 ||||||||| |||||||| || || | ||| |||| ||||| ||||| || ||||| | Sbjct 148367 GGCAAACAATTGGAAGATGGTCGAACATTAT--CCGACTACAACATTCAAAAAGAATCAA 148424 Query 29158 CTCTTCACATGGT 29170 | |||||| |||| Sbjct 148425 CACTTCACTTGGT 148437 >seq428 Length=150363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| | || || ||||| || || ||| |||||| Sbjct 127564 ATGCAAATCTTCGTCAAAACTCTTACTGGAAAAACTATCACTTTGGAAGTTGAACCCAGT 127623 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || || ||||||||||| | || ||| ||| Sbjct 127624 GACACCATTGAAAATGTCAAAGCCAAGATCCAAGATAAAGAAGGAATTCCACCAGACCAA 127683 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGA--TTCCAAAACTATGGCCGATTACA 29139 ||| | ||||||||||| || |||||||| ||||| || || || | || |||| Sbjct 127684 CAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGAACGTTAAG--TGACTACA 127741 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||| |||||| ||| |||||| | || | |||||||| || || Sbjct 127742 ATATTCAAAAGGAAAGTACACTTCACTTAGTACTTCGATTACGTGGTGG 127790 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/136 (74%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || ||| |||||| | ||||||||||| || |||||||| ||| Sbjct 126973 GATAAAGAAGGAATTCCACCAGACCAACAACGTCTTATCTTTGCCGGTAAACAACTCGAA 127032 Query 29115 GA--TTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172 || || || || | || ||||||||||| |||||| ||| |||||| | || Sbjct 127033 GACGGTCGAACGTTAAG--TGACTACAATATTCAAAAGGAAAGTACACTTCACTTAGTAC 127090 Query 29173 TACGATTACGAGGAGG 29188 | |||||||| || || Sbjct 127091 TTCGATTACGTGGTGG 127106 >seq483 Length=129801 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||||| ||||| | || || || || ||||| |||| || || | Sbjct 29805 AATGCAGATTTTCATTAAAACGCTAACCGGTAAGACGATTACTATCGAAGTTGATCCATC 29746 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | || |||||| ||| ||||||| | || ||||| Sbjct 29745 GGAATCGATCGAAGACGTAAAAGCTAAAATTCAAGATCAAGAAGGCATTCCACCTGATCA 29686 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138 |||| | | || ||||| || |||||||| |||||| || | ||| |||||||| Sbjct 29685 ACAACGTATGATTTTTGCTGGAAAACAACTTGAAGATGGTCGTACACTCA--CCGATTAC 29628 Query 29139 AATATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||| |||||||| ||||| Sbjct 29627 AATATTCAGAAAGAATCTACACTTCA 29602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428147195782385