Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq1298 1503 0.0 >seq1298 Length=11968 Score = 1503 bits (1666), Expect = 0.0 Identities = 860/878 (98%), Gaps = 0/878 (0%) Strand=Plus/Plus Query 28243 CCAAACGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 28302 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 9965 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 10024 Query 28303 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 28362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10025 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 10084 Query 28363 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 28422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10085 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 10144 Query 28423 GGCTCAACAGCCTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTG 28482 |||||||||||||||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct 10145 GGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTG 10204 Query 28483 GATCCTGTTGGCGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 28542 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10205 GAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 10264 Query 28543 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCA 28602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 10265 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTA 10324 Query 28603 GGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 28662 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10325 GGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 10384 Query 28663 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 28722 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10385 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 10444 Query 28723 AATTCTTCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAAT 28782 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 10445 AATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAAT 10504 Query 28783 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTGTCTGCG 28842 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10505 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCG 10564 Query 28843 ACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTAAGGCGA 28902 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10565 ACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGA 10624 Query 28903 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTTAAATC 28962 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10625 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATC 10684 Query 28963 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTAGCGGT 29022 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 10685 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGT 10744 Query 29023 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 29082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10745 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 10804 Query 29083 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 29120 |||||||||||||||||||||||||||||||||||||| Sbjct 10805 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 10842 Score = 275 bits (304), Expect = 2e-69 Identities = 225/279 (81%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 26626 TCACCGCCCTGGTGAGTAGTGCGTCCTGCTGATGTGTTTAGTATCACCGCCAGTGGTATT 26685 ||||| | ||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct 8284 TCACCTTCATGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATT 8343 Query 26686 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATNNNNNNNNNN 26745 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8344 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATA 8403 Query 26746 NNNNNNNNNNNNNNNNNCAGGGGTGTGTGGCTTGGGAGGTGATCGAGAGATCTGAATTGC 26805 |||||| | | | |||| |||||| |||||||||||||| Sbjct 8404 TGAATTTATTTTTTG--CAGGGGGGCATTGTTTGGTAGGTGA----GAGATCTGAATTGC 8457 Query 26806 GATGTTTAGTGAGTTGTATCTATTAATTTTCAAATAAATACAATTGGTTATGTGTTTT-G 26864 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct 8458 TATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGG 8517 Query 26865 GGGCGAACGTGAGGCAAAGAAACCCCGGCGCGGTGGCCG 26903 |||||| ||||||||||||||| |||||||| | ||||| Sbjct 8518 GGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCG 8556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126966246709876