Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq91 111 3e-19 seq27 104 4e-17 seq76 91.5 3e-13 seq245 89.7 9e-13 >seq91 Length=455798 Score = 111 bits (122), Expect = 3e-19 Identities = 150/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 189436 AACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCA 189495 |||| ||||| ||||||| || ||||||| || ||| | | |||||| |||||||| Sbjct 56418 AACTTATGATAAATTATGGAATGCATCACAAAATCAAATGATTAAAGAAGGTAAAATGCA 56477 Query 189496 TAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGA 189555 | | ||| | |||||||||||||| ||||| || || |||||||| | | |||| ||||| Sbjct 56478 TGGATTTCTTCGAATGTATTGGGCAAAGAAAATTCTCGAATGGACAAAATCACCGGAAGA 56537 Query 189556 CGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCT 189613 || |||| | | |||||| || || | || ||| || || || ||| ||||| Sbjct 56538 AGCAATTGAAAT-TGCTATCTACTTAAATGATAAATACAGTCTCGATGG-ACGTGATCCA 56595 Query 189614 AACGGATACGTAGGTTGTATGTGG 189637 || || || ||||| ||||||| Sbjct 56596 AATGGTTATGTAGGAGTTATGTGG 56619 >seq27 Length=690661 Score = 104 bits (114), Expect = 4e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 189450 TATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAA 189509 ||||||| || |||||||| || ||| | | |||||| ||||||||| | ||| | |||| Sbjct 224304 TATGGAATGCATCACAAATTCAAATGATTAAAGAAGGTAAAATGCATGGATTTCTTCGAA 224245 Query 189510 TGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTAT 189568 |||||||||| ||||| || || |||||||| | | |||| || || || |||| | | Sbjct 224244 TGTATTGGGCAAAGAAAATTCTCGAATGGACAAAATCACCAGACGAAGCAATTGAAAT-T 224186 Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 |||||| || || | || ||| || || ||| ||||| || || || || || Sbjct 224185 GCTATCTACTTAAATGATAAATACAGTCTCGATGGCCGTGATCCAAATGGTTATGTTGGA 224126 Query 189629 TGTATGTGG 189637 ||||||| Sbjct 224125 GTTATGTGG 224117 >seq76 Length=478225 Score = 91.5 bits (100), Expect = 3e-13 Identities = 260/390 (67%), Gaps = 30/390 (8%) Strand=Plus/Plus Query 135637 GATCCTGTTTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTA 135696 ||||| ||||| ||||| |||| | ||||| ||| || || | || || || ||| Sbjct 406725 GATCCAGTTTTACATATTCTACTTCGTGATTGGGCTGATATTCTTCTCATTGCACCATTA 406784 Query 135697 ACGGCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATT 135756 || ||||| |||||||||||| | ||| ||||| || ||| | | || |||| Sbjct 406785 GGTGCTAATACATTAGCAAAAATATCAGTTGGAATATGTGACAATCTTTTAACAAATATT 406844 Query 135757 GTAAGAGCCTGGGAT---ACAAAC---AAACCACTCATTTTCTGTCCTGCAATGAATACT 135810 || | || |||||| | |||| |||||| | ||| | ||||||||||||||| Sbjct 406845 GTTCGTGCATGGGATTTAAAAAACAAAAAACCATTAATTGTTGCACCTGCAATGAATACT 406904 Query 135811 CTTATGTGGGAACATCCTATTACAGAAAAACATATAGA------TACGTTAAAATATATG 135864 |||| |||||||| | || | |||| |||| |||| |||| || | Sbjct 406905 GCGATGTATGAACATCCATTAACGCGACAACAATTAGATTTAATTACG--AAAACAT-TC 406961 Query 135865 GGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGTGGAGACGTAGGAAATGGT 135924 || | |||||||| | |||||||||| ||| |||||| | || | |||| Sbjct 406962 GGATATATAGAAATTCCTTCGATAGAAAAAACACTTATGTGTGGACAAACTGGTATTGGT 407021 Query 135925 GCTATGGCAGAAGTTGCAGAAATCTATAGGGTTGTTAGAGATATAATG--AGAGTTT--A 135980 || |||||| ||| |||| ||| ||||| || ||| || | | ||| | Sbjct 407022 GCAATGGCATCAGT---GGAAA---ATA---TTGTTGCGGAAATATTGAAAAACTTTCAA 407072 Query 135981 AATATATAAAAAATATTATGTATAA-CTAA 136009 |||| |||||||| |||| || ||| |||| Sbjct 407073 AATACATAAAAAA-ATTAGGTTTAATCTAA 407101 >seq245 Length=256897 Score = 89.7 bits (98), Expect = 9e-13 Identities = 258/386 (67%), Gaps = 31/386 (8%) Strand=Plus/Plus Query 135637 GATCCTGTTTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTA 135696 ||||| ||||| ||||| |||| | ||||| ||| || || | || || || ||| Sbjct 98142 GATCCAGTTTTACATATTCTACTTCGTGATTGGGCTGATATTCTTCTCATTGCACCATTA 98201 Query 135697 ACGGCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATT 135756 || ||||| ||||| |||||| | ||| ||||| |||||| | | || |||| Sbjct 98202 GATGCTAATACATTAGCGAAAATATCAGTTGGAATATGTGATAATCTTTTAACAAATATT 98261 Query 135757 GTAAGAGCCTGGGAT---ACAAACAAA---CCACTCATTTTCTGTCCTGCAATGAATACT 135810 || | || |||||| | ||||||| ||| | ||| | ||||||||||||||| Sbjct 98262 GTTCGTGCATGGGATTTAAAAAACAAAAAACCATTAATTGTTGCACCTGCAATGAATACT 98321 Query 135811 CTTATGTGGGAACATCCTATT-ACAGAAAAACATATAGAT------ACGTTAAAATATAT 135863 |||| |||||| ||||| ||| | |||| ||||| ||| |||| || | Sbjct 98322 GCGATGTATGAACAT-CTATTAACACGACAACAATTAGATTTAATAACG--AAAACAT-T 98377 Query 135864 GGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGTGGAGACGTAGGAAATGG 135923 || | |||||||| | || ||||||| ||| |||||| | || | ||| Sbjct 98378 CGGATATATAGAAATTCCTTCGATTGAAAAAACACTTATGTGTGGACAAACTGGTATTGG 98437 Query 135924 TGCTATGGCAGAAGTTGCAGAAATCTATAGGGTTGTTAGAGATATAATG--AGAGTTT-- 135979 ||| |||||| ||| |||| ||| |||||| || ||| || | | ||| Sbjct 98438 TGCAATGGCATCAGT---GGAAA---ATA---TTGTTACGGAAATATTGAAAAACTTTCA 98488 Query 135980 AAATATATAAAAAATATTATGTATAA 136005 ||||| || ||||| |||| || ||| Sbjct 98489 AAATACATCAAAAA-ATTAAGTTTAA 98513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922779434266680