Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq83 161 9e-35 seq417 156 4e-33 seq163 105 6e-18 >seq83 Length=472686 Score = 161 bits (178), Expect = 9e-35 Identities = 230/319 (72%), Gaps = 10/319 (3%) Strand=Plus/Minus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || || ||||| || ||||||||||||||||||||||||||||| || ||||| || ||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || ||||| || || | ||||| | |||||| |||||| | |||| ||| |||| Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 ||||| || || ||||| || || |||||||| || | | ||||| ||||||| | Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 16685 ttttCGTTATCTGAAAGTT----TTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTC 16740 | ||| ||| | |||| |||||| || | ||| || | |||||| || || Sbjct 432602 TGTTC---ATC-GGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 432547 Query 16741 TTCTACA-GTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAA 16799 ||| ||| ||||||| ||| || | || |||||| | ||||||||| || | || Sbjct 432546 TTC-ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATT 432488 Query 16800 CAATAGGAAACACAACATA 16818 || ||||| | |||||| Sbjct 432487 TTATTGGAAATAGAACATA 432469 >seq417 Length=153455 Score = 156 bits (172), Expect = 4e-33 Identities = 229/319 (72%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || || ||||| || ||||||||||||||||||||||||||||| || ||||| || ||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAG 16624 || || || || || | ||||| | |||||| |||||| | |||| ||| |||| Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 16625 TTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAttt 16684 ||||| || || ||||| || || |||||||| || | | ||||| ||||||| | Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 16685 ttttCGTTATCTGAAAGTT----TTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTC 16740 | ||| ||| | |||| |||||| || | ||| || | |||||| || || Sbjct 94965 TGTTC---ATC-GGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 95020 Query 16741 TTCTACA-GTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAA 16799 ||| ||| ||||||| ||| || | || |||||| | ||||||||| || | || Sbjct 95021 TTC-ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATT 95079 Query 16800 CAATAGGAAACACAACATA 16818 || ||||| | |||||| Sbjct 95080 TTATTGGAAATAGAACATA 95098 >seq163 Length=332407 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16498 ATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGC 16557 |||| ||| || ||||| || | ||||||||||||||| ||||||||||| || ||||| Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 16558 TATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTC 16617 ||| ||||||||||| || || | ||||| | || ||| ||||| || |||| |||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTCGGATGAAAATTTTTC 173203 Query 16618 T 16618 | Sbjct 173202 T 173202 Score = 82.4 bits (90), Expect = 7e-11 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 16257 CTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTT 16316 |||| || | ||| ||||| || || |||||| | ||| ||||| | || |||| Sbjct 173611 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 173552 Query 16317 TAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATG 16376 | |||||| || | |||||||| ||| ||| || ||||||||||| ||||||| Sbjct 173551 GTAACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATG 173492 Query 16377 CAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttg 16436 |||| ||||| ||| | | | | | ||||| ||| ||||| ||||||||| | Sbjct 173491 CAACTAATCGTTCAGCAAATGGTGTTTTTTT--GTTC-ATCCAACGAATAGCCCAATCGG 173435 Query 16437 ctttttgtttAACA 16450 |||| | ||| ||| Sbjct 173434 CTTTCTTTTTCACA 173421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302904106200