Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq83 217 1e-51 seq417 208 7e-49 seq163 104 2e-17 seq15 102 8e-17 seq18856 82.4 7e-11 >seq83 Length=472686 Score = 217 bits (240), Expect = 1e-51 Identities = 235/309 (76%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959 |||||||| || | |||||||||||||||||||||||||||||| || || ||||||||| Sbjct 432779 TATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAAT 432720 Query 11960 CCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTC 12019 ||||||||||| ||||| || | || || || | ||||| ||| ||||||| Sbjct 432719 CCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATTT 432660 Query 12020 TCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTT 12079 ||| |||||||||||||| | |||||||| |||| | |||||| ||||| |||| | Sbjct 432659 TCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATATTGT 432600 Query 12080 TCGTCTTTAGTTAATTTATCCCAATCATCTAA-ATCTTTTGATAAATCTACTTCTTCAAC 12138 || || |||||| |||||| ||| | ||| || | |||||| ||||||||| Sbjct 432599 TCATCGGGAGTTAAACGTAACCAATC-TCTCATATCATTGGCTAAATCAACTTCTTCACA 432541 Query 12139 GGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGG 12198 ||||||| | ||||| || ||||||| | |||||| ||||||||||| || || || Sbjct 432540 TGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTATTGG 432481 Query 12199 GAAAATAAC 12207 || | ||| Sbjct 432480 AAATAGAAC 432472 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 11649 AACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtt 11708 ||||| | |||| ||| |||| ||||||| ||||||||| || ||||| | || || | Sbjct 433083 AACCT-CATCTCGACTAATTAATTCATTACTAAATGTTAAACCAGGCATAACACCACGCT 433025 Query 11709 tttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAA 11768 || |||||| |||| |||||||||||| || || ||||| || ||| |||| Sbjct 433024 CACGTAACCAAAAAATAGATGCAAATGAACCACTGAAAAAGATTCCTTCAACACAAGCAA 432965 Query 11769 ATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAG 11828 |||| |||| | ||| | || | || | |||||| | |||||||| | Sbjct 432964 ATGCAACTAAACGTTCAGCGAATGGTGTTTTATCATTTATCCAACGAATAGCCCAATCGG 432905 Query 11829 CTTTCTTTTTTAC 11841 ||||||||||||| Sbjct 432904 CTTTCTTTTTTAC 432892 >seq417 Length=153455 Score = 208 bits (230), Expect = 7e-49 Identities = 233/309 (75%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959 |||||||| || | |||||||||||||||||||||||||||||| || || ||||||||| Sbjct 94788 TATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAAT 94847 Query 11960 CCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTC 12019 || |||||||| ||||| || | || || || | ||||| ||| ||||||| Sbjct 94848 CCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATTT 94907 Query 12020 TCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTT 12079 ||| |||||||||||||| | |||||||| || | | |||||| ||||| |||| | Sbjct 94908 TCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATATTGT 94967 Query 12080 TCGTCTTTAGTTAATTTATCCCAATCATCT-AAATCTTTTGATAAATCTACTTCTTCAAC 12138 || || |||||| |||||| ||| | ||| || | |||||| ||||||||| Sbjct 94968 TCATCGGGAGTTAAACGTAACCAATC-TCTCATATCATTGGCTAAATCAACTTCTTCACA 95026 Query 12139 GGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGG 12198 ||||||| | ||||| || ||||||| | |||||| ||||||||||| || || || Sbjct 95027 TGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTATTGG 95086 Query 12199 GAAAATAAC 12207 || | ||| Sbjct 95087 AAATAGAAC 95095 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/193 (71%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 11649 AACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtt 11708 ||||| | |||| ||| |||| ||||||| ||||||||| || ||||| | || || | Sbjct 94484 AACCT-CATCTCGACTAATTAATTCATTACTAAATGTTAAGCCAGGCATAACACCACGCT 94542 Query 11709 tttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAA 11768 || |||||| |||| |||||||||||| || || ||||| || ||| |||| Sbjct 94543 CACGTAACCAAAAAATAGATGCAAATGAACCACTGAAAAAGATTCCTTCAACACAAGCAA 94602 Query 11769 ATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAG 11828 |||| |||| | ||| | || | || | |||||| | |||||||||| Sbjct 94603 ATGCAACTAAACGTTCAGCGAATGGTGTTTTATCATTTATCCAACGAATAGCCCAATCAG 94662 Query 11829 CTTTCTTTTTTAC 11841 ||||||||||||| Sbjct 94663 CTTTCTTTTTTAC 94675 >seq163 Length=332407 Score = 104 bits (114), Expect = 2e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 11900 TATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAAT 11959 || ||||| || ||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct 173312 TACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGCTATTTGAAAA 173253 Query 11960 CCATAGAAACATCGTGCCTC 11979 ||||||||||| ||||| || Sbjct 173252 CCATAGAAACAACGTGCTTC 173233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| |||| ||| |||| |||||| ||||||||| || ||||||| || |||| Sbjct 173611 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 173552 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 || |||||| || | |||||||| ||| ||| || || || || ||| |||||||| Sbjct 173551 GTAACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATG 173492 Query 11772 CTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTT 11831 | |||| || ||| || || | || | ||||| | |||||||| |||| Sbjct 173491 CAACTAATCGTTCAGCAAATGGTGTTTTTTTGTTCATCCAACGAATAGCCCAATCGGCTT 173432 Query 11832 TCTTTTTTAC 11841 ||||||| || Sbjct 173431 TCTTTTTCAC 173422 >seq15 Length=819560 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412 |||||| || | || ||| | |||||| ||||| || || | ||||||||| ||| Sbjct 384707 ACCTTTGCTAACGGGTGAACCTGGATATGTTTCATATGGACCATTGATTTTAGCTGATTC 384648 Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472 ||||| | || || ||| |||||||| |||||||||||||| | ||| | | || Sbjct 384647 ACAACTTGCTTTTAATGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTG 384588 Query 37473 TGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAAC 37532 |||||||| || ||||||| | | | || || || |||||| | ||| ||||| Sbjct 384587 AGCTTCTTCACTTTCGAATGGAAATCGCATCAAACAGAATGTATCAGCAAGACCTTGAAC 384528 Query 37533 ACCGATACCTATGGGTCTATG 37553 ||| ||||| || || | ||| Sbjct 384527 ACCAATACCAATTGGACGATG 384507 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 37353 ACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTC 37412 |||||| || | || ||| | |||||| ||||| || || | ||| |||||| ||| Sbjct 550126 ACCTTTGCTAACGGGTGAACCTGGATATGTTTCATATGGACCATTAATCTTAGCTGATTC 550185 Query 37413 GCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTT 37472 ||||| | || || ||| |||||||| |||||||||||||| | ||| | | || Sbjct 550186 ACAACTTGCTTTTAATGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTG 550245 Query 37473 TGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAAC 37532 |||||||| || ||||||| | | | || || || |||||| | ||| ||||| Sbjct 550246 AGCTTCTTCACTTTCGAATGGAAATCGCATCAAACAGAATGTATCAGCAAGACCTTGAAC 550305 Query 37533 ACCGATACCTATGGGTCTATG 37553 ||| ||||| || || | ||| Sbjct 550306 ACCAATACCAATTGGACGATG 550326 Score = 89.7 bits (98), Expect = 5e-13 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 38406 CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAA 38465 ||||| | | || || || || | ||| || | ||||||| | ||||||||||| || || Sbjct 383363 CAATG-ATTACCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAA 383305 Query 38466 ATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCT 38525 |||| |||||||| || || ||| ||||| || |||||||| | || || | Sbjct 383304 TAAATTGTATGTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACG 383245 Query 38526 CATTAGCATATGTTGTGGTCTTTC 38549 ||| |||||||||||||||| ||| Sbjct 383244 CATAAGCATATGTTGTGGTCGTTC 383221 Score = 89.7 bits (98), Expect = 5e-13 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 38406 CAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAA 38465 ||||| | | || || || || | ||| || | ||||||| | ||||||||||| || || Sbjct 551473 CAATG-ATTACCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAA 551531 Query 38466 ATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCT 38525 |||| |||||||| || || ||| ||||| || |||||||| | || || | Sbjct 551532 TAAATTGTATGTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACG 551591 Query 38526 CATTAGCATATGTTGTGGTCTTTC 38549 ||| |||||||||||||||| ||| Sbjct 551592 CATAAGCATATGTTGTGGTCGTTC 551615 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 || ||||| || ||||| | ||| | || | |||| |||||| |||||||||||||| Sbjct 384988 ACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAATT 384929 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTA 37249 || || || |||| | ||||| | |||||| || || ||||||||||||| Sbjct 384928 GATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTA 384877 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 || ||||| || ||||| | ||| | || | |||| |||||| |||||||||||||| Sbjct 549845 ACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAATT 549904 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTA 37249 || || || |||| | ||||| | |||||| || || ||||||||||||| Sbjct 549905 GATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTA 549956 >seq18856 Length=423 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/190 (70%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| |||| ||| |||| |||||| ||||||||| || ||||||| || |||| Sbjct 198 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 257 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 || |||||| || | |||||||| ||| ||| || || || || ||| |||| ||| Sbjct 258 GTAACCAAAAAATTGATGCAAATGATCCACTAAA-AAGATACCTTCAACACATGCAGATG 316 Query 11772 CTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTT 11831 | |||| || ||| || || | || | ||||| | |||||||| |||| Sbjct 317 CAACTAATCGTTCAGCAAATGGTGTTTTTTTGTTCATCCAACGAATAGCCCAATCGGCTT 376 Query 11832 TCTTTTTTAC 11841 ||||||| || Sbjct 377 TCTTTTTCAC 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468312985794480