Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq417 224 1e-53 seq83 215 7e-51 seq15 120 4e-22 seq163 109 7e-19 >seq417 Length=153455 Score = 224 bits (248), Expect = 1e-53 Identities = 241/319 (76%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 |||||||||||||||||||| | || || | || || ||||| ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 36538 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 36597 ||||||||||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 36598 AAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 36657 |||||||| ||| | || |||| |||||| | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 36658 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 36717 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 36718 TTGAATTGGAAAAATAACA 36736 || |||||||| | |||| Sbjct 95078 TTTTATTGGAAATAGAACA 95096 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/144 (76%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 35805 TGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTC--TTCTTG-AGACATAACTC 35861 ||||| ||||||||||| |||| || | || | || || || ||| || |||||| | Sbjct 94001 TGTTT-TTTAAAAATCAGCATCAAGTGTTAACTTATGTTCAGTTATTGCAGCCATAACAC 94059 Query 35862 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT-GAT 35920 | | ||| || ||||| |||||||||||||| ||||| |||||||| |||| ||| Sbjct 94060 CAGCTCGTTGATAATCACCAACACGTTTTTCGAAGAAATTTGTTTTACC-CGTAATGGAT 94118 Query 35921 ATATTTTCCATGAAATCGAATGGA 35944 ||||| | ||| ||||| || ||| Sbjct 94119 ATATTATTCATAAAATCAAACGGA 94142 >seq83 Length=472686 Score = 215 bits (238), Expect = 7e-51 Identities = 239/319 (75%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||||||||| |||||||| | || || | || || ||||| ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 36538 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 36597 ||||||||||| || || || ||||| || |||||||| || || |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 36598 AAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 36657 |||||||| ||| | || |||| |||||| | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 36658 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 36717 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 36718 TTGAATTGGAAAAATAACA 36736 || |||||||| | |||| Sbjct 432489 TTTTATTGGAAATAGAACA 432471 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/144 (76%), Gaps = 6/144 (4%) Strand=Plus/Minus Query 35805 TGTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGTC--TTCTTG-AGACATAACTC 35861 ||||| ||||||||||| |||| || | || | || || || ||| || |||||| | Sbjct 433568 TGTTT-TTTAAAAATCAGCATCAAGTGTTAACTTATGTTCAGTTATTGCAGCCATAACAC 433510 Query 35862 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT-GAT 35920 | | ||| || ||||| |||||||||||||| ||||| |||||||| |||| ||| Sbjct 433509 CAGCTCGTTGATAATCACCAACACGTTTTTCGAAGAAATTTGTTTTACC-CGTAATGGAT 433451 Query 35921 ATATTTTCCATGAAATCGAATGGA 35944 ||||| | ||| ||||| || ||| Sbjct 433450 ATATTATTCATAAAATCAAACGGA 433427 >seq15 Length=819560 Score = 120 bits (132), Expect = 4e-22 Identities = 369/565 (65%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687 ||||| | |||| ||| |||||||| || | ||| | || || || | |||| Sbjct 550420 GGATAGAAGTTAACATCAATAATTTTGTTCAAATTACGTACGATAACACTTGTTACATGA 550479 Query 65688 TTCAGTTTGAGAAAATCAAATCGCTC-ATCTATT---ACAAACATGTTCAATGCAACAGA 65743 ||||| |||||||||| | || |||| ||||| || | ||||| || Sbjct 550480 ACAAGTTTATCAAAATCAAAT-GTTCGATCTGGACGAACAAATCGATTAAGTGCAATTGA 550538 Query 65744 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 65803 ||||| ||||||||| || || ||||| | | | ||||| || || || || || | Sbjct 550539 TGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAA 550598 Query 65804 ATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 65863 ||| ||| | || || || | || |||||||||||| || |||||| ||| || Sbjct 550599 ATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTT 550658 Query 65864 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 65923 ||| | |||||||| |||||||||||||| || | | | ||| || ||| | | Sbjct 550659 ATATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATC 550718 Query 65924 TCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTT 65982 | | || || ||| || | | | | || || ||| ||| |||||| || || Sbjct 550719 TTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTT 550777 Query 65983 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 66042 |||| || | |||||||||||| | || ||||| || |||||||| || | || Sbjct 550778 CGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGTCC 550837 Query 66043 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 66102 | | | ||| | | | || || |||||| | ||| |||||||| | |||| ||| | Sbjct 550838 ATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAAGCTGGAAAGA 550897 Query 66103 AATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 66162 ||| | | | | ||| || || ||||| ||| ||| | ||| | | | Sbjct 550898 GATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAACTCAAAGA 550957 Query 66163 TATCATAATGCCACGGTTCCAAGTA 66187 |||| |||||| |||||||| || Sbjct 550958 TATCCGCATGCCATGGTTCCAAATA 550982 Score = 116 bits (128), Expect = 5e-21 Identities = 251/373 (67%), Gaps = 2/373 (1%) Strand=Plus/Minus Query 65735 TGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 65794 ||||| ||||||| ||||||||| || || ||||| | | | ||||| || || || Sbjct 384303 TGCAATTGATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTC 384244 Query 65795 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 65854 || || | ||| ||| | || || || | || |||||||||||| || ||||| Sbjct 384243 CGTACATAAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACA 384184 Query 65855 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 65914 | ||| ||||| || |||||||| |||||||||||||| || | | | ||| || Sbjct 384183 CTGATCTTTATATAGCATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAA 384124 Query 65915 CCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTAT 65973 ||| | || | || || ||| || | | | | || || ||| ||| ||||| Sbjct 384123 CCAAAGATCTTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTAT 384065 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033 | || |||||| || | |||||||||||| | || ||||| || ||||||| Sbjct 384064 ATAAATCTTCGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACA 384005 Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 | || | ||| | | ||| | | | || || |||||| | ||| |||||||| | | Sbjct 384004 TTAATGTCCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAGG 383945 Query 66094 CTATAAATAAATC 66106 || ||| | ||| Sbjct 383944 CTGGAAAGAGATC 383932 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 65300 ACTATTTCTAAGACCGTAT 65318 |||||| | | ||| ||| Sbjct 384869 ACTATTACGAGTACCATAT 384851 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 65300 ACTATTTCTAAGACCGTAT 65318 |||||| | | ||| ||| Sbjct 549964 ACTATTACGAGTACCATAT 549982 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 66579 TGCTGAGGTCTTTCAACGAT 66598 || || |||| |||||| || Sbjct 383234 TGTTGTGGTCGTTCAACAAT 383215 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 66579 TGCTGAGGTCTTTCAACGAT 66598 || || |||| |||||| || Sbjct 551602 TGTTGTGGTCGTTCAACAAT 551621 >seq163 Length=332407 Score = 109 bits (120), Expect = 7e-19 Identities = 99/122 (81%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || ||||||||||| | ||||||||||||||||||||| |||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTCTGTACAAAATCGTT 36536 |||||||| || |||||||| | || || |||||| || ||||| | ||||| || Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAAT-TGAACTTCGGATGAAAATTTTT 173204 Query 36537 CT 36538 || Sbjct 173203 CT 173202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657875248304280