Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq417 210 3e-49 seq83 201 2e-46 seq15 125 1e-23 seq163 98.7 1e-15 >seq417 Length=153455 Score = 210 bits (232), Expect = 3e-49 Identities = 238/319 (75%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | || ||||| || | | |||||||||||| |||||||| |||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || ||||||||||||||||| | || || | || || ||||| ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399 | ||||||||||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 50400 AAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 50459 ||||| || ||| | ||| |||| |||||| | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 50460 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 50519 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 50520 TTGGATTGGGAAAATAACA 50538 || ||||| || | |||| Sbjct 95078 TTTTATTGGAAATAGAACA 95096 >seq83 Length=472686 Score = 201 bits (222), Expect = 2e-46 Identities = 236/319 (74%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | || ||||| || | | |||||||||||| |||||||| |||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || |||||||| |||||||| | || || | || || ||||| ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399 | ||||||||||| || || || ||||| || |||||||| || || |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 50400 AAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 50459 ||||| || ||| | ||| |||| |||||| | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 50460 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 50519 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 50520 TTGGATTGGGAAAATAACA 50538 || ||||| || | |||| Sbjct 432489 TTTTATTGGAAATAGAACA 432471 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/219 (69%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| |||| |||||||| ||| || ||| || | || ||||| | ||||||| Sbjct 433081 CCTCATCTCGACTAATTAATTCATTACTAAATGTTAAACCAGGCATAACACCACGCTCAC 433022 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | |||||| || || |||||||| ||| || ||||||||||| || ||||| | Sbjct 433021 GTAACCAAAAAATAGATGCAAATGAACCACTGAAAAAGATTCCTTCAACACAAGCAAATG 432962 Query 50102 CAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTATCCACTTTTGAGCCCAATCGGC 50159 |||| | | || | | ||| | | |||| |||||| |||||||||||| Sbjct 432961 CAACTAAACGTTCAGC--GAATGGTGTTTTATCATTTATCCAACGAATAGCCCAATCGGC 432904 Query 50160 CTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 |||||||||||| |||| | ||| || ||||| || Sbjct 432903 TTTCTTTTTTACATAAGGTAAAGTTGAAATTGCATTGAA 432865 >seq15 Length=819560 Score = 125 bits (138), Expect = 1e-23 Identities = 368/564 (65%), Gaps = 5/564 (1%) Strand=Plus/Plus Query 79507 GGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCC 79566 ||||| | |||| ||| |||||||| || | ||| | || || || | |||| Sbjct 550420 GGATAGAAGTTAACATCAATAATTTTGTTCAAATTACGTACGATAACACTTGTTACATGA 550479 Query 79567 TTTAGTTTGAGAAAATCAAATCGTCCATCTATT---ACAAACATGTTCAACGCGACAGAT 79623 ||||| |||||||||| || |||| ||||| || | || | ||| Sbjct 550480 ACAAGTTTATCAAAATCAAATGTTCGATCTGGACGAACAAATCGATTAAGTGCAATTGAT 550539 Query 79624 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGG 79683 |||| ||||||||| || || ||||| | | | ||||| || ||||| || || | Sbjct 550540 GCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAAA 550599 Query 79684 TTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 79743 || ||| | ||| || || | || |||||||||||| || |||||| ||| ||| Sbjct 550600 TTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTTA 550659 Query 79744 TAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 79803 || | ||||| || |||||||||||||| || | | | ||| || ||| | || Sbjct 550660 TATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATCT 550719 Query 79804 CGAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTC 79862 | || || ||| || | | | | | || || ||| |||| ||||||||| ||| Sbjct 550720 TGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTTC 550778 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 ||| || | ||||||||||| | ||| ||||| | |||||||| || | ||| Sbjct 550779 GAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGTCCA 550838 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 | | | | | | | || || |||||| | ||| |||||||| | |||| ||| || Sbjct 550839 TTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAAGCTGGAAAGAG 550898 Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042 ||| | | | | || || || ||||| ||| ||| | ||| | | || Sbjct 550899 ATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAACTCAAAGAT 550958 Query 80043 ATCAGAATGCCACGGTTCCAAGTA 80066 ||| | |||||| |||||||| || Sbjct 550959 ATCCGCATGCCATGGTTCCAAATA 550982 Score = 122 bits (134), Expect = 1e-22 Identities = 248/366 (68%), Gaps = 2/366 (1%) Strand=Plus/Minus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 ||||||| ||||||||| || || ||||| | | | ||||| || ||||| || || Sbjct 384296 GATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACAT 384237 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 | || ||| | ||| || || | || |||||||||||| || |||||| ||| Sbjct 384236 AAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCT 384177 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 ||||| || ||||| || |||||||||||||| || | | | ||| || ||| | Sbjct 384176 TTATATAGCATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGA 384117 Query 79801 ACTCGAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCG 79859 || | || || ||| || | | | | | || || ||| |||| ||||||||| Sbjct 384116 TCTTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATC 384058 Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 |||||| || | ||||||||||| | ||| ||||| | |||||||| || | Sbjct 384057 TTCGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGT 383998 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||| | | | | | | | || || |||||| | ||| |||||||| | ||| ||| Sbjct 383997 CCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAGGCTGGAAA 383938 Query 79980 TAGATC 79985 ||||| Sbjct 383937 GAGATC 383932 Score = 111 bits (122), Expect = 2e-19 Identities = 159/221 (72%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 |||||||||||| ||||| | ||| | || ||| | ||| |||||||||||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||| || || || | |||||| || || || || |||||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 79179 ACTATTTCTAAGACCGTATGATCTGATTTTATCT--TTTAGAGATTC---CCAATCCCAA 79233 |||||| | | ||| ||| ||| ||||| | || ||| ||||| |||| Sbjct 384869 ACTATTACGAGTACCATAT----TGA-GATATCTGACTACGAAGTTCTGTCCAATTCCAA 384815 Query 79234 AGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 ||| || || |||||||| | |||| |||||||||| Sbjct 384814 CGATTGGATGGTGTTACATTCCACATATCAAATTGTAGAAT 384774 Score = 111 bits (122), Expect = 2e-19 Identities = 159/221 (72%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 |||||||||||| ||||| | ||| | || ||| | ||| |||||||||||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||| || || || | |||||| || || || || |||||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 79179 ACTATTTCTAAGACCGTATGATCTGATTTTATCT--TTTAGAGATTC---CCAATCCCAA 79233 |||||| | | ||| ||| ||| ||||| | || ||| ||||| |||| Sbjct 549964 ACTATTACGAGTACCATAT----TGA-GATATCTGACTACGAAGTTCTGTCCAATTCCAA 550018 Query 79234 AGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 ||| || || |||||||| | |||| |||||||||| Sbjct 550019 CGATTGGATGGTGTTACATTCCACATATCAAATTGTAGAAT 550059 Score = 98.7 bits (108), Expect = 1e-15 Identities = 145/205 (71%), Gaps = 8/205 (4%) Strand=Plus/Minus Query 79275 ACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTC 79334 ||| || ||| || ||| |||| ||||||||||| || || | ||| ||| |||| Sbjct 384707 ACCTTTGCTAACGGGTGAACCTGGATATGTTTCATATGGACCATTGATTTTAGCTGATTC 384648 Query 79335 ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 79394 |||||| || | |||||| | |||||||| ||||||||||| | ||| || | ||| Sbjct 384647 ACAACTTGCTTTTAATGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTG 384588 Query 79395 TGCTTCTAGGCTATCAAATGGATA----ATTTAAGAGAATAAACGCGTCTGCTAATCCTT 79450 |||||| || || |||||| | || || ||||| | || || | |||| Sbjct 384587 AGCTTCTTCACTTTCGAATGGAAATCGCATCAAACAGAAT----GTATCAGCAAGACCTT 384532 Query 79451 GAACACCAATACCGATAGGTCTATG 79475 ||||||||||||| || || | ||| Sbjct 384531 GAACACCAATACCAATTGGACGATG 384507 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/226 (69%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 79275 ACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTC 79334 ||| || ||| || ||| |||| ||||||||||| || || | | | ||| |||| Sbjct 550126 ACCTTTGCTAACGGGTGAACCTGGATATGTTTCATATGGACCATTAATCTTAGCTGATTC 550185 Query 79335 ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 79394 |||||| || | |||||| | |||||||| ||||||||||| | ||| || | ||| Sbjct 550186 ACAACTTGCTTTTAATGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTG 550245 Query 79395 TGCTTCTAGGCTATCAAATGGATA----ATTTAAGAGAATAAACGCGTCTGCTAATCCTT 79450 |||||| || || |||||| | || || ||||| | || || | |||| Sbjct 550246 AGCTTCTTCACTTTCGAATGGAAATCGCATCAAACAGAAT----GTATCAGCAAGACCTT 550301 Query 79451 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGC 79496 ||||||||||||| || || | ||| | ||||||| || ||| Sbjct 550302 GAACACCAATACCAATTGGACGATGACGAAGATTAGAATCTTTAGC 550347 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 80458 TGCTGAGGTCTTTCAACGAT 80477 || || |||| |||||| || Sbjct 383234 TGTTGTGGTCGTTCAACAAT 383215 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 80458 TGCTGAGGTCTTTCAACGAT 80477 || || |||| |||||| || Sbjct 551602 TGTTGTGGTCGTTCAACAAT 551621 >seq163 Length=332407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/106 (82%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| || ||||| ||||| | ||||||||||||||||||||| |||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGCACTTC 50324 || ||||| || |||||||| | || || |||||| || ||||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAAT-TGAACTTC 173218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717944079653880