Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq417 141 9e-29 seq83 141 9e-29 seq163 104 2e-17 >seq417 Length=153455 Score = 141 bits (156), Expect = 9e-29 Identities = 218/309 (71%), Gaps = 8/309 (3%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 |||||||||||||||||||| ||||||||||| || || || ||||| || || || ||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || || || || || | ||||| | ||| ||||| | ||||| ||| | ||| Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||| || ||||||||||| || |||||||| ||||| | | ||| ||||| ||| Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 14322 TGCTCTTCATTGTTGAGTT----TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 || ||||| | ||||| | |||||| | ||| || | | ||| ||||| Sbjct 94965 TG---TTCATCG-GGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 95020 Query 14378 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAA 14437 ||| |||||||| | || | || |||||| | | |||||| || | |||| Sbjct 95021 TTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTT 95080 Query 14438 TATAGGAAA 14446 ||| ||||| Sbjct 95081 TATTGGAAA 95089 >seq83 Length=472686 Score = 141 bits (156), Expect = 9e-29 Identities = 218/309 (71%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 |||||||||||||||||||| ||||||||||| || || || ||||| || || || ||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 || ||||| || || | ||||| | ||| ||||| | ||||| ||| | ||| Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||| || ||||||||||| || |||||||| || || | | ||| ||||| ||| Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 14322 TGCTCTTCATTGTTGAGTT----TTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTC 14377 || ||||| | ||||| | |||||| | ||| || | | ||| ||||| Sbjct 432602 TG---TTCATCG-GGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 432547 Query 14378 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAA 14437 ||| |||||||| | || | || |||||| | | |||||| || | |||| Sbjct 432546 TTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTT 432487 Query 14438 TATAGGAAA 14446 ||| ||||| Sbjct 432486 TATTGGAAA 432478 >seq163 Length=332407 Score = 104 bits (114), Expect = 2e-17 Identities = 263/410 (64%), Gaps = 54/410 (13%) Strand=Plus/Minus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 ||||||| ||| || | ||| || ||||||||| || ||||||| || |||| | Sbjct 173609 TCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCACGT 173550 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14015 |||||||| |||| |||||||| || ||| || || || ||||| ||||| || Sbjct 173549 AACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATGCA 173490 Query 14016 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAt 14075 | ||||||||| |||| | || |||||||||| ||||| ||||||| || | | Sbjct 173489 ACTAATCGTTCAGCAAATGGTGTTTTTTTGTTC---ATCCAACGAATAGCCCAATCGGCT 173433 Query 14076 ttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA------------------ 14117 || ||||| | | | | ||| ||| ||||| |||||| Sbjct 173432 TTCTTTTTCACATATGGTAACGTTGAAATGGCATTGAATAAAATATCTCTACAAAGAAAA 173373 Query 14118 ---------------TATTCCTTCTCTTTAG-----TAC--------TTGA-----AATG 14144 ||| | | ||||| | ||| | || |||| Sbjct 173372 GTGCTCGCATTTAGTTATCCAATTTCTTTCGAAATCTACCGTTCACGTGGATCTTTAATG 173313 Query 14145 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14204 || |||||||| | ||| ||||||||||| || || || ||||| || ||||| |||||| Sbjct 173312 TACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGCTATTTGAAAA 173253 Query 14205 CCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTC 14254 ||||| || || | ||||| | |||| ||||| || ||||| |||| Sbjct 173252 CCATAGAAACAACGTGCTTCAGGTAATTGAACTTCGGATGAAAATTTTTC 173203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479511120967800