Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq417 141 9e-29 seq83 141 9e-29 seq163 95.1 1e-14 >seq417 Length=153455 Score = 141 bits (156), Expect = 9e-29 Identities = 218/309 (71%), Gaps = 8/309 (3%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 |||||||||||||||||||| ||||||||||| || || || ||||| || || || ||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || || || ||||| | ||||| | ||| || || | ||||| ||| | || Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 |||||| |||||||||||||| || |||||||| ||||| | | ||| ||||| ||| Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 14110 TGCTCTTCATTGTTGAGTT----TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTC 14165 || ||||| | ||||| | |||||| | ||| || | | ||| ||||| Sbjct 94965 TG---TTCATCG-GGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 95020 Query 14166 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAA 14225 ||| |||||||| | || | || |||||| | | |||||| || | |||| Sbjct 95021 TTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTT 95080 Query 14226 TATAGGAAA 14234 ||| ||||| Sbjct 95081 TATTGGAAA 95089 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/223 (69%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||| |||||| | ||| || ||||||||| || ||||| | || || | Sbjct 94486 CCTCATCTCGACTAATTAATTCATTACTAAATGTTAAGCCAGGCATAACACCACGCTCAC 94545 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 ||||||||| || | || ||||| || || || ||||| ||||| |||||| | Sbjct 94546 GTAACCAAAAAATAGATGCAAATGAACCACTGAAAAAGATTCCTTCAACACAAGCAAATG 94605 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | | || ||||| | || | || ||| | ||| ||||| ||||||| |||| Sbjct 94606 CAACTAAACGTTCAGCGAATGGTGTTTTATCATTT---ATCCAACGAATAGCCCAATCAG 94662 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 ||| ||||| | | || | ||| |||||||||||||| Sbjct 94663 CTTTCTTTTTTACATAAGGTAAAGTTGAAATTGCATTGAATAA 94705 >seq83 Length=472686 Score = 141 bits (156), Expect = 9e-29 Identities = 218/309 (71%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 |||||||||||||||||||| ||||||||||| || || || ||||| || || || ||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAG 14049 || ||||| ||||| | ||||| | ||| || || | ||||| ||| | || Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 14050 TTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14109 |||||| |||||||||||||| || |||||||| || || | | ||| ||||| ||| Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 14110 TGCTCTTCATTGTTGAGTT----TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTC 14165 || ||||| | ||||| | |||||| | ||| || | | ||| ||||| Sbjct 432602 TG---TTCATCG-GGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTC 432547 Query 14166 ATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAA 14225 ||| |||||||| | || | || |||||| | | |||||| || | |||| Sbjct 432546 TTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTT 432487 Query 14226 TATAGGAAA 14234 ||| ||||| Sbjct 432486 TATTGGAAA 432478 >seq163 Length=332407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 |||||| |||||||| | ||| ||||||||||| || || || ||||| || ||||| || Sbjct 173316 AATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGCTATTTG 173257 Query 13989 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCT 14043 ||||||||| ||||| | ||||| | |||| || || || ||||| ||||| Sbjct 173256 AAAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTCGGATGAAAATTTTTCT 173202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478372435985880