Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq8 111 1e-19 seq919 107 1e-18 seq428 100 2e-16 seq140 100 2e-16 seq6255 91.5 1e-13 seq106 86.0 5e-12 seq154 82.4 6e-11 >seq8 Length=956989 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| | || | || | ||||| || || |||||||| | ||||| || Sbjct 228 GCCACCACGTAATCGAAGTACAAGATGGAGTGTACTTTCCTTTTGAATGTTGTAGTCACT 287 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | |||||| |||||||| |||||||| |||||||| | || Sbjct 288 TAACGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAGATCAATCGTTGTTGATCAGGAGG 347 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| ||||||| | ||| ||||| | | || || Sbjct 348 GATACCTTCCTTATCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTTGGTTCAAC 407 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || |||||||| || |||||||| || ||||||||||| || Sbjct 408 TTCCAAAGTGATTGTTTTTCCAGTAAGAGTTTTGACGAAAATTTGCATGTT 458 >seq919 Length=36295 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||||||| || |||||||| | |||||||||||| Sbjct 21661 CCACCACGAAGACGAAGAACCAAATGGAGTGTTGATTCCTTTTGGATATTGTAATCGGAT 21602 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| ||| | || || | |||||| || ||||| ||||| || |||||||| | || Sbjct 21601 AATGTTCGTCCATCTTCAAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGA 21542 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || || | ||||| | ||| ||||||| | ||||| Sbjct 21541 ATACCTTCCTTGTCTTGAATTTTGGCCTTGACGTTTTCAATTGTGTCGGATGGTTCGACT 21482 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| || || || ||||| || || |||||||| Sbjct 21481 TCGAGGGTGATTGTTTTGCCAGTAAGTGTTTTGACGAAGATTTGCAT 21435 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGC----TCTCCTTTTGCACATTGTAATC 42938 || ||||| || | | |||||||||| || | | ||||||| | ||||| || Sbjct 22349 CCACCACGAAGYCGAAGAACCAAATGGAGTGTTCGAAGTTCCCTTTTGAATGTTGTAGTC 22290 Query 42939 GGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGC 42998 ||| ||||| || | || ||||||||||| || || || ||||| || |||||||| | Sbjct 22289 GGATAATGTTCGACCATCTTCCAATTGTTTACCAGCGAAGATCAAACGTTGTTGATCAGG 22230 Query 42999 CGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTC 43058 || | |||||| || || || |||| || | ||| ||||||| | || Sbjct 22229 TGGAATACCTTCCTTGTCTTGAATTTTGGCTTTAACATTTTCAATTGTGTCGGATGGTTC 22170 Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||| || | || || ||||| || || || ||||| || || |||||||| Sbjct 22169 GACTTCGAGGGTGATTGTTTTGCCAGTAAGTGTTTTGACGAAGATTTGCAT 22119 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||||| ||||| ||||| || | || |||||||||||||| |||||| Sbjct 19314 TCTTTTTGAATGTTGTAGTCGGATAATGTTCGACCATCTTCCAATTGTTTGCCAGCAAAA 19255 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016 || ||||| ||||| || | || | ||||||||| || Sbjct 19254 ATTAATCGTTGTTGGTCAGGTGGAATACCTTCTTTATC 19217 >seq428 Length=150363 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| | || | || | ||| | || || |||||||| | ||||| ||| Sbjct 126879 GCCACCACGTAATCGAAGTACAAGATGAAGTGTACTTTCCTTTTGAATGTTGTAGTCGCT 126820 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 |||||| || |||| || | |||||| |||||||| || | || ||||| || | || Sbjct 126819 CAATGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGG 126760 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||||| || |||| ||||||| | | | ||||| | | || || Sbjct 126759 AATTCCTTCTTTATCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCACTTGGTTCAAC 126700 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||||||||| || |||||||| || ||||||||||| Sbjct 126699 TTCCAAAGTGATAGTTTTTCCAGTAAGAGTTTTGACGAAAATTTGCAT 126652 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| | || | || || || | || || |||||||| | |||||| || Sbjct 127791 GCCACCACGTAATCGAAGTACTAAGTGAAGTGTACTTTCCTTTTGAATATTGTAGTCACT 127732 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | |||||| |||||||| || | || ||||| || | || Sbjct 127731 TAACGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGG 127672 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||||| || |||| ||||||| | ||| ||||| | | || || Sbjct 127671 AATTCCTTCTTTATCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGTTCAAC 127612 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||||||||| || |||||||| || || |||||||| Sbjct 127611 TTCCAAAGTGATAGTTTTTCCAGTAAGAGTTTTGACGAAGATTTGCAT 127564 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||| | || | || | ||| | || || |||||||| | |||||| || Sbjct 128486 GCCACCACGTAATCGAAGTACAAGATGAAGTGTACTTTCCTTTTGAATATTGTAGTCACT 128427 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || |||| || | ||||| || || || || | || |||||||| | || Sbjct 128426 TAACGTTCGACCGTCTTCGAGCTGTTTACCAGCGAAGATAAGACGTTGTTGATCAGGAGG 128367 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || |||| ||||||| | ||| ||||| | | || || Sbjct 128366 GATACCTTCCTTATCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGTTCAAC 128307 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||||||||| || |||||||| || || |||||||| Sbjct 128306 TTCCAAAGTGATAGTTTTTCCAGTAAGAGTTTTGACGAAGATTTGCAT 128259 >seq140 Length=369268 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42880 TCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCG 42939 || || ||||| |||| | || | ||||| || || || ||||| | ||||||||| Sbjct 126104 TCACCACCACGAAGTCGAAGTACGAGATGGAGTGTACTTTCTTTTTGAATATTGTAATCA 126045 Query 42940 GACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCC 42999 || || || |||| || | |||||| || |||||||| | ||| |||||||||| Sbjct 126044 CTTAAAGTGCGACCGTCTTCGAGTTGTTTACCAGCAAAAATGAGTCGTTGTTGATCGGGT 125985 Query 43000 GGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 || | ||||||||| || ||| | || || | | | ||||| | | ||| Sbjct 125984 GGAATACCTTCTTTATCTTGGATTTTAGCCTTAACGTTTTCGATGGTGTCACTTGGTTCG 125925 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || |||||||| || || ||||| || ||||||||||| Sbjct 125924 ACTTCAAGTGTAATTGTTTTTCCAGTGAGTGTTTTAACGAAAATTTGCAT 125875 >seq6255 Length=968 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||||| | || |||||||| | ||| || ||| Sbjct 351 CCACCACGGAGACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCGCTT 292 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| || |||| || | ||||||||||||||| || | || |||||||| | || Sbjct 291 AATGTGCGACCGTCTTCGAGTTGTTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGA 232 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || |||| | ||||| | | | || || | | || || Sbjct 231 ATGCCTTCTTTATCTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACT 172 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || ||||| ||||| |||||||| || ||||||||||| || Sbjct 171 TCGAGAGTGATGGTTTTACCGGTGAGAGTTTTGACGAAAATTTGCATGTT 122 >seq106 Length=426470 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42880 TCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCG 42939 || || ||||| |||| | || | ||||| || || || ||||| | ||||||||| Sbjct 416481 TCACCACCACGAAGTCGAAGTACGAGATGGAGTGTACTTTCTTTTTGAATATTGTAATCA 416540 Query 42940 GACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCC 42999 || || || |||| || | |||||| || |||||||| | || |||||||| | Sbjct 416541 CTTAAAGTGCGACCGTCTTCGAGTTGTTTACCAGCAAAAATGAGACGTTGTTGATCAGGT 416600 Query 43000 GGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 || | ||||||||| || ||| | || || | | | ||||| | | ||| Sbjct 416601 GGGATACCTTCTTTATCTTGGATTTTAGCCTTAACGTTTTCGATGGTGTCACTTGGTTCG 416660 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | || || ||||| || || || ||||| || ||||||||||| Sbjct 416661 ACTTCAAGTGTAATTGTTTTGCCAGTGAGTGTTTTAACGAAAATTTGCAT 416710 >seq154 Length=348346 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||||| ||||| ||||| || | || |||||||||||||| |||||| Sbjct 148419 TCTTTTTGAATGTTGTAGTCGGATAATGTTCGACCATCTTCCAATTGTTTGCCAGCAAAA 148360 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016 || ||||| ||||| || | || | ||||||||| || Sbjct 148359 ATTAATCGTTGTTGGTCAGGTGGAATACCTTCTTTATC 148322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381201497881686