Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq26295 324 4e-84 seq32719 194 4e-45 seq31060 174 4e-39 >seq26295 Length=286 Score = 324 bits (358), Expect = 4e-84 Identities = 243/286 (85%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 1653 CGTGAAATAGACGGGAAAACGCATTTTTACAGCGTGGCGCCACGTTTCTGGGTGCCGTAT 1712 || || || ||||| |||||||||| ||||| ||||| || ||||||||||| |||||| Sbjct 286 CGCGAGATTGACGGTAAAACGCATTACTACAGTGTGGCCCCGCGTTTCTGGGTACCGTAT 227 Query 1713 GACACGGTCTACAGTGTTGAGAAAAATGAGGATCGCCGTACTGCGGAACGTTTTCAGAAA 1772 |||||||| ||||| || ||||||||||| |||||||| || || ||||| ||||||||| Sbjct 226 GACACGGTGTACAGCGTCGAGAAAAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAA 167 Query 1773 TGGGTTGAAATGGGCTTTTTGACAGTAACTGATGGTGCGGAGGTGGATTACCGCTACATC 1832 ||||| ||||||||| || |||| || || |||||||||||||||||||| ||||||||| Sbjct 166 TGGGTGGAAATGGGCGTTCTGACCGTTACCGATGGTGCGGAGGTGGATTATCGCTACATC 107 Query 1833 CTTGAAGAGGCCAAAGCTGCGAACAAACTGAACCCGGTCAGCGAATCCCCCATTGATCCA 1892 || |||||||||||||| ||||||||| | | ||||||||| || || ||||| || || Sbjct 106 CTCGAAGAGGCCAAAGCGGCGAACAAAATCAGCCCGGTCAGTGAGTCACCCATCGACCCC 47 Query 1893 TTTGGTGCCACCGGGCTTTCACATGATCTAGCTGATGAAAACCTGA 1938 || || || |||||||| |||||||| || ||||||||| |||||| Sbjct 46 TTCGGGGCSACCGGGCTGTCACATGACCTTGCTGATGAAGACCTGA 1 >seq32719 Length=185 Score = 194 bits (214), Expect = 4e-45 Identities = 142/165 (86%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35311 CAGGGAGGGATGGGAACAAAGGCGCATGACCTCTTTGTGCTGCCGTTGTGCAGAACGCAT 35370 ||||| || ||||||||||| || ||||| ||||||||| |||| |||||||||| |||| Sbjct 1 CAGGGCGGAATGGGAACAAAAGCACATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCAT 60 Query 35371 CACAATGAGTTACATGCGGACACCGTGGCATTCGAAGAGAAATACGGCTCTCAACTGGAG 35430 ||||| ||| | ||| |||| || |||||||| ||||| || || ||||| ||||||||| Sbjct 61 CACAACGAGCTGCATACGGATACAGTGGCATTTGAAGATAAGTATGGCTCCCAACTGGAG 120 Query 35431 TTGATATTTCGTTTTATCGATCGCGCACTGGCGATTGGTGTACTG 35475 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct 121 CTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTG 165 >seq31060 Length=214 Score = 174 bits (192), Expect = 4e-39 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 32124 CTGATACGTCAGGCAGAAACACTGGAGTCGGGAGGGTTGTTCCGTCGTGCAGCTACGGTA 32183 |||| || ||||| ||| ||||||||| | || || | ||||||||| || ||||| Sbjct 206 CTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTGCAACGGTG 147 Query 32184 TGGATGGAGGCATTCCGGGAGAGTCATATCCCGTCGGAACGTAGCGCCTTTCTGGCGCGC 32243 ||||||| ||||||||| || || || || | | ||||| | | ||||||||||| Sbjct 146 TGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTCTGGCGCGT 87 Query 32244 CGTGAACGGTGTTTGCGGAAGAGCAGAAAGTCTGTTGCATCAGGTAGTGAGTGGTATCTG 32303 |||||||||||||| ||||| ||||| ||| | |||||||||| ||||||||||| Sbjct 86 CGTGAACGGTGTTTACGGAAAAGCAGTAAGCGGGCTGCATCAGGTGAAGAGTGGTATCTC 27 Query 32304 TCAGGGAATTATGTGGGGTCTTAATG 32329 ||||||||||| |||||| ||||||| Sbjct 26 TCAGGGAATTACGTGGGGGCTTAATG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128300073607594