Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq106 89.7 4e-13 seq140 87.8 1e-12 >seq106 Length=426470 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || ||||| |||||||||||||| || | |||| |||| || || |||||||| Sbjct 416970 GTTGACTCTTTTTGAATATTGTAGTCACTGAGTGTTCGACCGTCTTCGAGTTGTTTACCG 417029 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| | ||||| | || ||||| || | || |||||||| |||||| || Sbjct 417030 GCAAAGATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTAGCCTTA 417089 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||||||| ||| || ||||| || || ||||| || || || ||| Sbjct 417090 ACGTTTTCAATTGTATCGCTAGGTTCAACTTCGAGTGTGATTGTTTTGCCGGTCAAGGTT 417149 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| ||||||||||| Sbjct 417150 TTGACGAAAATTTGCAT 417166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 18851 TCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAA 18910 || ||||||||||| || || | ||| | || || || |||||||| ||| || Sbjct 417492 TCTTTTTGAATATTATAGTCGCTTAGTGTACGACCATCTTCGAGTTGTTTACCGGCAAAA 417551 Query 18911 ATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGG 18970 ||||| | || ||||| || | || |||||||| |||||| || || | Sbjct 417552 ATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATTTTAGCCTTAACGTTT 417611 Query 18971 CCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACA 19030 ||| || || | || || ||| | |||||||||||||| |||||||||||||| Sbjct 417612 TCGATGGTGTCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCAGTTAAAGTTTTGACG 417671 Query 19031 AAAATTTGCAT 19041 ||||||||||| Sbjct 417672 AAAATTTGCAT 417682 >seq140 Length=369268 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 18851 TCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAA 18910 || ||||||||||| || || | ||| | || || || |||||||| ||| || Sbjct 124863 TCTTTTTGAATATTATAGTCGCTTAGTGTACGACCATCTTCGAGTTGTTTACCGGCAAAA 124804 Query 18911 ATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGG 18970 ||||| | || ||||| || | || |||||||| |||||| || || | Sbjct 124803 ATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATTTTAGCCTTGACGTTT 124744 Query 18971 CCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACA 19030 ||| ||||| | || || ||| | |||||||||||||| |||||||||||||| Sbjct 124743 TCGATCGTATCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCAGTTAAAGTTTTGACG 124684 Query 19031 AAAATTTGCAT 19041 ||||||||||| Sbjct 124683 AAAATTTGCAT 124673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414390062398798