Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq1298 609 9e-170 >seq1298 Length=11968 Score = 609 bits (674), Expect = 9e-170 Identities = 379/407 (93%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 42793 CCAAACGTCTCTTCAGGCCATTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 42852 |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||| Sbjct 9965 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 10024 Query 42853 TTGCATGGGATCATTGGATATTGCGGGTTTAGTGGTTGTAGAAACACCTGACCGCTATCC 42912 ||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||| Sbjct 10025 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 10084 Query 42913 CTGATCAGTTTCTTGAAGGTAAATTCATCACCACCAAGTCTGGCTATGCAGAAATCGCCG 42972 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || Sbjct 10085 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 10144 Query 42973 GGCTCAACAGCTTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTG 43032 ||||||||||| |||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct 10145 GGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTG 10204 Query 43033 GAACCTGTTGGTGCGGTCATTGAGTTACCTTCAACCTCAAGCCAGAATGCAGAGTCACTG 43092 || ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| Sbjct 10205 GAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 10264 Query 43093 GCTTTTTTGGTTGTGCTTACCAATCTCTCCGCATCACCTTTGGTAAAGGTTCTGAGTTCT 43152 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | Sbjct 10265 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTA 10324 Query 43153 GGAGAGAACATCCCAGCCTGAACATGAGAAAAAACAGGGTACTCATA 43199 || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 10325 GGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATA 10371 Score = 145 bits (160), Expect = 3e-30 Identities = 105/120 (88%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 41349 GAGAGATCAGAATTGCGTTGTTTAGTGAGTTGTATCTATTTATTTTCCAATAAATACAAT 41408 |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 8442 GAGAGATCTGAATTGCTATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAAT 8501 Query 41409 TGGTTATGTGtttttttGGGCGA----GAGGAAAAGAAAACCCGGCATGGAGGCCGGGTT 41464 |||||||||| |||| |||||| |||| |||||||||||||| ||||||||||| Sbjct 8502 TGGTTATGTG-TTTTGGGGGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 8560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200446007381829