Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq20 100 2e-16 seq428 98.7 6e-16 seq919 95.1 8e-15 seq8 91.5 9e-14 seq6255 89.7 3e-13 seq679 86.0 4e-12 seq140 86.0 4e-12 seq106 86.0 4e-12 seq154 84.2 1e-11 >seq20 Length=760496 Score = 100 bits (110), Expect = 2e-16 Identities = 174/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || | ||| || | |||||||| | ||| || || ||||| ||||| || ||| Sbjct 309280 CCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCACTT 309339 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 || || | ||| || | |||||| || ||| || | ||||| || || | || Sbjct 309340 AATGTGCGACCGTCTTCGAGTTGCTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGA 309399 Query 33263 ATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319 ||||||||||| || ||| |||| | || ||| || || || | |||| Sbjct 309400 ATGCCTTCTTTATCTTGGATCTTGGCCT---TGACGTTTTCGATAGTATCACTTGGTTCC 309456 Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGGTT 33379 || || ||||| || ||||| || || |||||||| |||||||||||||||||||| || Sbjct 309457 ACTTCGAGAGTGATGGTTTTACCGGTGAGAGTTTTGACGAAAATTTGCATGTTTATTGT- 309515 Query 33380 AATGTTCGCAA 33390 |||||| || Sbjct 309516 -GTGTTCGGAA 309525 >seq428 Length=150363 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAAT 33238 || ||||| |||||||| ||| || | | ||| || | ||| || || ||| Sbjct 127754 TCCTTTTGAATATTGTAGTCACTTAACGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAG 127695 Query 33239 ATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTT 33298 || | |||||| ||||| | || || |||||||| || ||| ||| || || Sbjct 127694 ATAAGACGTTGTTGGTCTGGTGGAATTCCTTCTTTATCTTGGATCTTGGCTTTGACATTT 127635 Query 33299 TGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACG 33358 | ||| ||||| |||||| ||| |||| ||| || |||||||| ||||||||||| ||| Sbjct 127634 TCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATAGTTTTTCCAGTAAGAGTTTTGACG 127575 Query 33359 AAAATTTGCATG 33370 || ||||||||| Sbjct 127574 AAGATTTGCATG 127563 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAAT 33238 || ||||| |||||||| ||| || | | ||| || | ||| || || ||| Sbjct 127070 TCCTTTTGAATATTGTAGTCACTTAACGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAG 127011 Query 33239 ATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTT 33298 || | |||||| ||||| | || || |||||||| || ||| ||| || || Sbjct 127010 ATAAGACGTTGTTGGTCTGGTGGAATTCCTTCTTTATCTTGGATCTTGGCTTTGACATTT 126951 Query 33299 TGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACG 33358 | ||| ||||| |||||| ||| |||| ||| || ||||| || ||||||||||| ||| Sbjct 126950 TCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATAGTTTTACCAGTAAGAGTTTTAACG 126891 Query 33359 AAAATTTGCATG 33370 || ||||||||| Sbjct 126890 AAGATTTGCATG 126879 Score = 91.5 bits (100), Expect = 9e-14 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 33214 GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT 33273 ||| || | ||| || || ||| || | |||||| ||||| | || || |||||||| Sbjct 126807 GTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGAATTCCTTCTTT 126748 Query 33274 TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 || ||| ||| || ||| || ||||| | |||| ||| |||| ||| || Sbjct 126747 ATCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCACTTGGTTCAACTTCCAAAGTGAT 126688 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 |||||||| ||||||||||| ||||||||||||||| || Sbjct 126687 AGTTTTTCCAGTAAGAGTTTTGACGAAAATTTGCATGCTT 126648 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAAT 33238 || ||||| |||||||| ||| || | | ||| || | || || ||| || Sbjct 128449 TCCTTTTGAATATTGTAGTCACTTAACGTTCGACCGTCTTCGAGCTGTTTACCAGCGAAG 128390 Query 33239 ATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTT 33298 || | |||||| || || | || || ||||| || || ||| ||| || || Sbjct 128389 ATAAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTGGCTTTGACATTT 128330 Query 33299 TGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACG 33358 | ||| ||||| |||||| ||| |||| ||| || |||||||| ||||||||||| ||| Sbjct 128329 TCAATGGTGTCACTGGGTTCAACTTCCAAAGTGATAGTTTTTCCAGTAAGAGTTTTGACG 128270 Query 33359 AAAATTTGCATG 33370 || ||||||||| Sbjct 128269 AAGATTTGCATG 128258 >seq919 Length=36295 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | ||| || || ||||| ||||||||||| || || | || || || Sbjct 21643 ACCAAATGGAGTGTTGATTCCTTTTGGATATTGTAATCGGATAATGTTCGTCCATCTTCA 21584 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | ||| || ||| ||| || |||||||| || || | || || ||||| || || | Sbjct 21583 AGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 21524 Query 33281 A---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || ||| ||| |||||| |||| || || || || || ||| Sbjct 21523 ATTTTGGCC---TTGACGTTTTCAATTGTGTCGGATGGTTCGACTTCGAGGGTGATTGTT 21467 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| ||||| ||||| |||||||| Sbjct 21466 TTGCCAGTAAGTGTTTTGACGAAGATTTGCAT 21435 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | ||| || |||||||| || ||||| || || || | | || || Sbjct 22099 ACCAAGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGATAATGTTCGACCATCTTCT 22040 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 ||||| || ||| ||| ||||||||||| || || | || || ||||| || || | Sbjct 22039 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 21980 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || ||| ||| |||||| |||| || || || || || ||||| Sbjct 21979 ATTTTGGCTTTAACATTTTCAATTGTGTCGGATGGTTCGACTTCGAGGGTGATTGTTTTG 21920 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| ||||| |||||||| Sbjct 21919 CCAGTAAGTGTTTTGACGAAGATTTGCAT 21891 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | ||| || || ||||| |||||||| || || || | | || || Sbjct 22559 ACCAAGTGAAGTGTTGATTCCTTTTGGATATTGTAGTCCGATAATGTTCGACCATCTTCT 22500 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 ||||| || ||| ||| ||||||||||| || || | || || ||||| || || | Sbjct 22499 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 22440 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || |||||| ||| ||| || || | |||| || |||| ||| || ||||| Sbjct 22439 ATTTTGGCTTTTACGTTTTCAATTGTATCACTTGGTTCGACTTCCAAAGTAATTGTTTTG 22380 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || ||||| |||||||| Sbjct 22379 CCGGTGAGGGTCTTGACGAAGATTTGCAT 22351 >seq8 Length=956989 Score = 91.5 bits (100), Expect = 9e-14 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 33214 GTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT 33273 ||| || | ||| || || ||| || || ||||| || || | || || ||||| || Sbjct 300 GTCTTCGAGTTGTTTACCGGCAAAGATCAATCGTTGTTGATCAGGAGGGATACCTTCCTT 359 Query 33274 TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333 || ||| ||| || ||| ||| ||||| | |||| ||| |||| ||| || Sbjct 360 ATCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCACTTGGTTCAACTTCCAAAGTGAT 419 Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 |||||||| ||||||||||| |||||||||||||||||| Sbjct 420 TGTTTTTCCAGTAAGAGTTTTGACGAAAATTTGCATGTTT 459 >seq6255 Length=968 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | ||| || || ||||| ||||| || || || || | ||| || Sbjct 333 ACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCGCTTAATGTGCGACCGTCTTCG 274 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | ||| || || ||| || | ||||| || || | || ||||||||||| || Sbjct 273 AGTTGTTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGG 214 Query 33281 ATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 ||| |||| | || ||| || || || | |||| || || ||||| || ||| Sbjct 213 ATCTTGGCCT---TGACGTTTTCGATAGTATCACTTGGTTCCACTTCGAGAGTGATGGTT 157 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGGTTAATGTTCGCAA 33390 || || || |||||||| |||||||||||||||||||| || |||||| || Sbjct 156 TTACCGGTGAGAGTTTTGACGAAAATTTGCATGTTTATTGT--GTGTTCGGAA 106 >seq679 Length=77933 Score = 86.0 bits (94), Expect = 4e-12 Identities = 172/253 (68%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| || | ||| || | |||||||| | ||| || || ||||| || ||||| ||| Sbjct 32897 CACCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAGTCAC 32838 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 || || | || || | ||| || || || || | ||||| || || | | Sbjct 32837 TTAATGTGCGACCATCTTCGAGTTGTTTGCCGGCGAAGATGAGGCGTTGTTGATCTGGTG 32778 Query 33261 GTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 | ||||||||||| || ||| |||| | || ||| || || || | |||| Sbjct 32777 GAATGCCTTCTTTGTCTTGGATCTTGGCCT---TGACGTTTTCGATAGTATCACTTGGTT 32721 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGG 33377 || |||| ||| || ||||| || || |||||||| |||||||||||||||||| | | Sbjct 32720 CCACTTCCAAAGTGATGGTTTTGCCGGTCAGAGTTTTGACGAAAATTTGCATGTTTGTTG 32661 Query 33378 TTAATGTTCGCAA 33390 | |||||| || Sbjct 32660 T--GTGTTCGGAA 32650 >seq140 Length=369268 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAAT 33238 |||||||| |||||||||||| ||| || | ||| || | ||| || ||| ||| Sbjct 126065 TCTTTTTGAATATTGTAATCACTTAAAGTGCGACCGTCTTCGAGTTGTTTACCAGCAAAA 126006 Query 33239 ATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACT 33295 || | ||||| || || | || || |||||||| || | | | |||| | || Sbjct 126005 ATGAGTCGTTGTTGATCGGGTGGAATACCTTCTTTATCTTGGATTTTAGCCT---TAACG 125949 Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355 ||| || ||||| | |||| || || || || || |||||||| || || ||||| Sbjct 125948 TTTTCGATGGTGTCACTTGGTTCGACTTCAAGTGTAATTGTTTTTCCAGTGAGTGTTTTA 125889 Query 33356 ACGAAAATTTGCAT 33369 |||||||||||||| Sbjct 125888 ACGAAAATTTGCAT 125875 >seq106 Length=426470 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAAT 33238 |||||||| |||||||||||| ||| || | ||| || | ||| || ||| ||| Sbjct 416520 TCTTTTTGAATATTGTAATCACTTAAAGTGCGACCGTCTTCGAGTTGTTTACCAGCAAAA 416579 Query 33239 ATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACT 33295 || | |||||| || || | || || |||||||| || | | | ||| || || Sbjct 416580 ATGAGACGTTGTTGATCAGGTGGGATACCTTCTTTATCTTGGATTTTAGCC---TTAACG 416636 Query 33296 GTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTT 33355 ||| || ||||| | |||| || || || || || ||||| || || || ||||| Sbjct 416637 TTTTCGATGGTGTCACTTGGTTCGACTTCAAGTGTAATTGTTTTGCCAGTGAGTGTTTTA 416696 Query 33356 ACGAAAATTTGCAT 33369 |||||||||||||| Sbjct 416697 ACGAAAATTTGCAT 416710 >seq154 Length=348346 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | ||| || || ||||| |||||||| || || || | | || || Sbjct 148893 ACCAAGTGAAGTGTTGATTCCTTTTGGATATTGTAGTCGGATAATGTTCGACCATCTTCT 148834 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 || || || ||| ||| ||||||||||| || || | || || ||||| || || | Sbjct 148833 AACTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 148774 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 || ||| || ||| ||| || || | |||| || || || || || ||||| Sbjct 148773 ATTTTGGCTTTAACATTTTCAATTGTATCACTTGGTTCGACTTCGAGGGTGATTGTTTTG 148714 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| ||||| |||||||| Sbjct 148713 CCAGTAAGTGTTTTGACGAAGATTTGCAT 148685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318637087515966