Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq679 114 1e-20 seq106 107 2e-18 seq6255 98.7 8e-16 seq140 98.7 8e-16 seq919 96.9 3e-15 seq19782 95.1 1e-14 seq17103 89.7 4e-13 seq20 89.7 4e-13 >seq679 Length=77933 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | | |||||||| ||||| ||||| ||||| |||||||| || | Sbjct 32895 CCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTT 32836 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| | ||||||||| || | || || | |||||||| || Sbjct 32835 AATGTGCGACCATCTTCGAGTTGTTTGCCGGCGAAGATGAGGCGTTGTTGATCTGGTGGA 32776 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| || || || || | | | || ||| | |||||| | Sbjct 32775 ATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACT 32716 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212 |||| || |||||||||||||||| |||||||| ||||||||||| ||| Sbjct 32715 TCCAAAGTGATGGTTTTGCCGGTCAGAGTTTTGACGAAAATTTGCATGTTT 32665 >seq106 Length=426470 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || || || ||||| || |||||||| || ||||| || | | ||| | ||||| Sbjct 416958 ACTAAGTGGAGTGTTGACTCTTTTTGAATATTGTAGTCACTGAGTGTTCGACCGTCTTCG 417017 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | ||||| | |||||||| || | ||||||||||| | Sbjct 417018 AGTTGTTTACCGGCAAAGATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGA 417077 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | ||| | ||||| |||||| ||| | || || |||||| Sbjct 417078 ATTTTAGCCTTAACGTTTTCAATTGTATCGCTAGGTTCAACTTCGAGTGTGATTGTTTTG 417137 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||||||| |||||||| ||||||||||| Sbjct 417138 CCGGTCAAGGTTTTGACGAAAATTTGCAT 417166 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAAT 20062 ||| |||||| ||||||||| || || || |||| |||| | || |||||| | | Sbjct 417479 ATGAAGTGTACTTTCTTTTTGAATATTATAGTCGCT--TAGTGTACGACCATCTTCGAGT 417536 Query 20063 TGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATT 20122 ||||| || ||| ||||||| | |||||||| || | ||||||||||| |||| Sbjct 417537 TGTTTACCGGCAAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATT 417596 Query 20123 TTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCG 20182 || || || | | | | || | ||||| ||| | ||||||||||| || Sbjct 417597 TTAGCCTTAACGTTTTCGATGGTGTCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCA 417656 Query 20183 GTCAACGTTTTGACAAAAATTTGCAT 20208 || || |||||||| ||||||||||| Sbjct 417657 GTTAAAGTTTTGACGAAAATTTGCAT 417682 >seq6255 Length=968 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| ||||| ||||| ||||| || || || |||| | || | ||||| Sbjct 333 ACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCGCTTAATGTGCGACCGTCTTCG 274 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||||||||| ||| | ||||| | |||||||| || | ||||||||| || Sbjct 273 AGTTGTTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGG 214 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || || || | | | || ||| | |||||| ||| | || |||||||| Sbjct 213 ATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACTTCGAGAGTGATGGTTTTA 154 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTA 20213 ||||| | |||||||| ||||||||||| |||| Sbjct 153 CCGGTGAGAGTTTTGACGAAAATTTGCATGTTTA 120 >seq140 Length=369268 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | | || ||||| || || ||||||||||| |||||||| || | Sbjct 125127 CCACCACGTAAACGAAGTACTAAATGAAGGGTTGATTCTTTTTGGATGTTGTAGTCACTG 125068 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| |||||||| || ||| | ||||| | |||||||| || Sbjct 125067 AGTGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGTCGTTGTTGATCAGGTGGG 125008 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| || || | | | | ||| | ||||| | Sbjct 125007 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATGGTATCACTTGGTTCAACT 124948 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || || |||||||| ||||| |||||||| ||||||||||| Sbjct 124947 TCAAGTGTGATTGTTTTGCCCGTCAAGGTTTTGACGAAAATTTGCAT 124901 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAAT 20062 ||| |||||| ||||||||| || || || |||| |||| | || |||||| | | Sbjct 124876 ATGAAGTGTACTTTCTTTTTGAATATTATAGTCGCT--TAGTGTACGACCATCTTCGAGT 124819 Query 20063 TGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATT 20122 ||||| || ||| ||||||| | |||||||| || | ||||||||||| |||| Sbjct 124818 TGTTTACCGGCAAAAATAAGACGTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATT 124759 Query 20123 TTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCG 20182 || || || | | | | ||| | ||||| ||| | ||||||||||| || Sbjct 124758 TTAGCCTTGACGTTTTCGATCGTATCACTTGGTTCAACTTCAAGTGTAATGGTTTTACCA 124699 Query 20183 GTCAACGTTTTGACAAAAATTTGCAT 20208 || || |||||||| ||||||||||| Sbjct 124698 GTTAAAGTTTTGACGAAAATTTGCAT 124673 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || || || || || ||||| ||||| |||||||| || | | ||| | ||||| Sbjct 125627 ACTAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCACTGAGTGTTCGACCGTCTTCG 125568 Query 20060 AATTGTTTGCCCGCATAA-ATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | |||||| || ||| || ||||| | |||||||| || | ||||||||||| Sbjct 125567 AGTTGTTTACCGGCAAAAGATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTG 125508 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 |||||| || || | ||| | ||| | ||||| ||| | ||||| ||||| Sbjct 125507 AATTTTGGCYTTGACATTTTCAATGGTATCACTTGGTTCGACTTCAAGTGTAATTGTTTT 125448 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | |||||||| ||||||||||| Sbjct 125447 TCCAGTGAGTGTTTTGACGAAAATTTGCAT 125418 >seq919 Length=36295 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057 ||||| || ||||| ||||||||||| |||||||| ||| ||| | || || ||||| Sbjct 22099 ACCAAGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG--GATAATGTTCGACCATCTT 22042 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | |||||||| || ||| | || | | |||||||| || | ||||| ||||| Sbjct 22041 CTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 21982 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 |||||| ||| || | ||| | ||| ||||| ||| | ||| || |||| Sbjct 21981 GAATTTTGGCTTTAACATTTTCAATTGTGTCGGATGGTTCGACTTCGAGGGTGATTGTTT 21922 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || | |||||||| || |||||||| Sbjct 21921 TGCCAGTAAGTGTTTTGACGAAGATTTGCAT 21891 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057 ||||| || ||||| ||||| ||||| || ||||| || | ||| | || || ||||| Sbjct 22559 ACCAAGTGAAGTGTTGATTCCTTTTGGATATTGTAGTC--CGATAATGTTCGACCATCTT 22502 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | |||||||| || ||| | || | | |||||||| || | ||||| ||||| Sbjct 22501 CTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 22442 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 |||||| ||| || | ||| | ||| | ||||| ||||| ||||| |||| Sbjct 22441 GAATTTTGGCTTTTACGTTTTCAATTGTATCACTTGGTTCGACTTCCAAAGTAATTGTTT 22382 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||||| | || ||||| || |||||||| Sbjct 22381 TGCCGGTGAGGGTCTTGACGAAGATTTGCAT 22351 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057 || || || ||||| ||||||||||| |||||||| ||| ||| | || || ||||| Sbjct 21871 ACTAAGTGGAGTGTCGATTCTTTTTGAATGTTGTAGTCG--GATAATGTTCGACCATCTT 21814 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | |||||||| || ||| | || | | |||||||| || | ||||| ||||| Sbjct 21813 CTAATTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 21754 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 |||||| || || | ||| | || || || ||| | |||||| |||| Sbjct 21753 GAATTTTGGCCTTGACGTTTTCAATTGTGTCTGATGGCTCAACTTCGAGGGTAATTGTTT 21694 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || || |||||||| || |||||||| Sbjct 21693 TGCCTGTTAAGGTTTTGACGAAGATTTGCAT 21663 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/216 (69%), Gaps = 9/216 (4%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057 ||||| || ||||| ||||||||||| |||||||| ||| ||| | || || ||||| Sbjct 19793 ACCAAGTGGAGTGTCGATTCTTTTTGAATGTTGTAGTCG--GATAATGTTCGACCATCTT 19736 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | | |||||| || ||| | || | | |||||||| || | ||||| ||||| Sbjct 19735 CAAGTTGTTTACCAGCAAAGATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 19676 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 |||||| ||| || | ||| | ||| | ||||| ||| | ||| || |||| Sbjct 19675 GAATTTTGGCTTTAACATTTTCAATTGTATCACTTGGTTCGACTTCGAGGGTGATTGTTT 19616 Query 20178 TGCCGGTCAACGT-----TTTGACAAAAATTTGCAT 20208 |||| || | || |||||| || |||||||| Sbjct 19615 TGCCAGTAAGTGTTTTGNTTTGACGAAGATTTGCAT 19580 >seq19782 Length=400 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | | |||||||| ||||| ||||| ||||| || || || || | Sbjct 363 CCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCACTT 304 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||| | ||||||||| ||| | ||||| | |||||||| || Sbjct 303 AATGTGCGACCGTCTTCGAGTTGTTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGA 244 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| || || || || | | | || ||| | |||||| | Sbjct 243 ATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACT 184 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || |||||||| ||||| | |||||||| ||||||||||| Sbjct 183 TCGAGAGTGATGGTTTTACCGGTGAGTGTTTTGACGAAAATTTGCAT 137 >seq17103 Length=470 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || || || || || ||||| ||||| |||||||| || | | ||| | ||||| Sbjct 186 ACTAAGTGGAGGGTTGATTCCTTTTGGATGTTGTAGTCACTGAGTGTTCGACCGTCTTCG 245 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | |||||| || ||| | ||||| | |||||||| || | ||||||||||| | Sbjct 246 AGTTGTTTACCGGCAAAGATAAGGCGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGA 305 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||| || | ||| | ||| | ||||| ||| | ||||| ||||| Sbjct 306 ATTTTGGCTTTGACATTTTCAATGGTATCACTTGGTTCGACTTCAAGTGTAATTGTTTTT 365 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | |||||||| ||||||||||| Sbjct 366 CCAGTGAGTGTTTTGACGAAAATTTGCAT 394 >seq20 Length=760496 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| ||||| ||||| ||||| || || || || | | || | ||||| Sbjct 309070 ACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCACTTAATGTGCGACCGTCTTCG 309129 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||||||||| ||| | ||||| | |||||||| || | ||||||||| || Sbjct 309130 AGTTGTTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGG 309189 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || || || || | | | || ||| | |||||| ||| | || |||||||| Sbjct 309190 ATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACTTCGAGAGTGATGGTTTTA 309249 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| | |||||||| ||||||||||| Sbjct 309250 CCGGTGAGTGTTTTGACGAAAATTTGCAT 309278 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | | |||||||| ||||| ||||| ||||| || || || || | Sbjct 309280 CCACCACGTAAACGAAGTACCAAATGAAGTGTTGATTCCTTTTGGATATTATAGTCACTT 309339 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||| | ||| ||||| ||| | ||||| | |||||||| || Sbjct 309340 AATGTGCGACCGTCTTCGAGTTGCTTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGA 309399 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||| || || || || || | | | || ||| | |||||| | Sbjct 309400 ATGCCTTCTTTATCTTGGATCTTGGCCTTGACGTTTTCGATAGTATCACTTGGTTCCACT 309459 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTA 20213 || | || |||||||| ||||| | |||||||| ||||||||||| |||| Sbjct 309460 TCGAGAGTGATGGTTTTACCGGTGAGAGTTTTGACGAAAATTTGCATGTTTA 309511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419402252124927