Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq83 143 2e-29 seq417 138 1e-27 seq163 118 9e-22 >seq83 Length=472686 Score = 143 bits (158), Expect = 2e-29 Identities = 219/312 (70%), Gaps = 4/312 (1%) Strand=Plus/Minus Query 13427 GTATCTATCAATAAG----CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAA 13482 |||| |||||||||| |||||||||||||||||||||||||| || || ||||| || Sbjct 432780 GTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAA 432721 Query 13483 ACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTT 13542 ||||| ||||| | || || | || |||||||| | ||||| ||| |||| || Sbjct 432720 TCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATT 432661 Query 13543 TTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtttttt 13602 ||| || || || ||||| |||||||||||||| | | || || ||||| | || Sbjct 432660 TTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATATTG 432601 Query 13603 ttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 ||| | | || |||||||||| | ||| || | |||||| || || ||| Sbjct 432600 TTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACA 432541 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGG 13722 ||||||| ||| || | || ||||| | |||||||||| | ||| || || Sbjct 432540 TGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTATTGG 432481 Query 13723 AAACACAACGTA 13734 ||| | ||| || Sbjct 432480 AAATAGAACATA 432469 >seq417 Length=153455 Score = 138 bits (152), Expect = 1e-27 Identities = 218/312 (70%), Gaps = 4/312 (1%) Strand=Plus/Plus Query 13427 GTATCTATCAATAAG----CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAA 13482 |||| |||||||||| |||||||||||||||||||||||||| || || ||||| || Sbjct 94787 GTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAA 94846 Query 13483 ACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTT 13542 || || ||||| | || || | || |||||||| | ||||| ||| |||| || Sbjct 94847 TCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATT 94906 Query 13543 TTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAtttttt 13602 ||| || || || ||||| |||||||||||||| | | || || ||||| | || Sbjct 94907 TTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATATTG 94966 Query 13603 ttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAAC 13662 ||| | | || |||||||||| | ||| || | |||||| || || ||| Sbjct 94967 TTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACA 95026 Query 13663 GGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGG 13722 ||||||| ||| || | || ||||| | |||||||||| | ||| || || Sbjct 95027 TGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTATTGG 95086 Query 13723 AAACACAACGTA 13734 ||| | ||| || Sbjct 95087 AAATAGAACATA 95098 >seq163 Length=332407 Score = 118 bits (130), Expect = 9e-22 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||| || ||||| |||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct 173316 AATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGCTATTTG 173257 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCT 13534 |||||||| ||||| | || || | || ||||||||||| ||||| ||||| Sbjct 173256 AAAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTCGGATGAAAATTTTTCT 173202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430792429288134