Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq1298 506 5e-139 seq28989 143 7e-30 seq29063 134 3e-27 seq33178 96.9 9e-16 >seq1298 Length=11968 Score = 506 bits (560), Expect = 5e-139 Identities = 297/306 (97%), Gaps = 3/306 (1%) Strand=Plus/Plus Query 25351 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGCTGCAGGTTGCTTTCAATC 25410 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 7838 GGCTTGCTGTACCATGTGCGCTGATTCTTGCGCTCAATACGTTGCAGGTTGCTTTCAATC 7897 Query 25411 TGTTCGTGGTATTCAGCCAGCACCGTAAGGTCTATCGGATTCAGTGCGCTTTCTACTCGT 25470 |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 7898 TGTTTGTGGTATTCAGCCAGCACTGTAAGGTCTATCGGATTTAGTGCGCTTTCTACTCGT 7957 Query 25471 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCA 25530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7958 GATTTCGGTTTGCGATTCAGCGAGAGAATAGGGCGGTTAACTGGTTTTGCGCTTACCCCA 8017 Query 25531 ACTAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 25590 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8018 ACCAACAGGGGATTTGCTGCTTTCCATTGAGCCTGTTTCTCTGCGCGACGTTCGCGGCGG 8077 Query 25591 CGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGTGGTGGC--TG 25648 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 8078 CGTGTTTGTGCATCCATCTGGATTCTCCTGTCAGTTAGCTTTGGTGGTGT-GTGGCAGTT 8136 Query 25649 GTAGTC 25654 |||||| Sbjct 8137 GTAGTC 8142 Score = 167 bits (184), Expect = 6e-37 Identities = 94/95 (99%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 25846 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 25905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8223 CACACCCCAAAGCCTTCTGCTTTGAATGCTGCCCTTCTTCAGGGCTTAATTTTTAAGAGC 8282 Query 25906 CTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 25940 |||||||||||||||||||||||||||||||||| Sbjct 8283 GTCACCTTCATGGTGGTCAGTGCGTCCTGCTGATG 8317 >seq28989 Length=247 Score = 143 bits (158), Expect = 7e-30 Identities = 79/79 (100%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 33596 TGGCTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGT 33655 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 TGGCTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGCCGTCTGGT 188 Query 33656 TTTTCAGGACGGTTTTTCC 33674 ||||||||||||||||||| Sbjct 187 TTTTCAGGACGGTTTTTCC 169 >seq29063 Length=246 Score = 134 bits (148), Expect = 3e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 21615 GTGAACCTATCCTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGA 21674 ||| | | |||||| ||| |||||| |||||| | || |||| | ||||| | | Sbjct 246 GTGTAGCGATCCTGACCGGATTGATCGGTCCATTTACGGGTACGCAGCTGACCTTCGATA 187 Query 21675 TAAACCTCAGAGCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATT 21734 ||||||| ||| ||||| |||||||||||||| || | |||||||||||| ||| || Sbjct 186 TAAACCTGAGAACCTTTACGCAGATATTCGCTCGCCACTTCTGCCAGTTTGCCGAACAGC 127 Query 21735 ACCACGCGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGT 21794 || ||||||||||| || ||||| || || ||| || || ||||||||||| | Sbjct 126 ACAACGCGGTGCCATTCAGTCTGTTCTTTCATCTCGCCGGTCGCTTTATCACGCCAGGAT 67 Query 21795 TCTGACGTAGCAACTGTAAGGTTTGCAAATGC 21826 || || ||||| | |||| ||| |||| ||| Sbjct 66 TCGGAAGTAGCCAGCGTAATGTTGGCAACTGC 35 >seq33178 Length=176 Score = 96.9 bits (106), Expect = 9e-16 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 18057 AGGGGATTTTGCGGACTGGTACGGATGGAGGCGAACTGATAAATGGTGTCCCCTGCAG 18114 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 AGGGGATTTTGCGGACTGGTACGGATGGGAGCGAACTGATAAATGGTGTCCCCTGCAG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124762393634270