Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq3030 2161 0.0 seq4615 872 0.0 seq25834 336 1e-87 seq25588 187 2e-42 seq29063 104 1e-17 >seq3030 Length=1779 Score = 2161 bits (2396), Expect = 0.0 Identities = 1200/1201 (99%), Gaps = 0/1201 (0%) Strand=Plus/Plus Query 7649 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 7708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23 TAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTT 82 Query 7709 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 7768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 CATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC 142 Query 7769 TTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATT 7828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 TTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATT 202 Query 7829 TGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTC 7888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 203 TGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTC 262 Query 7889 AGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGGG 7948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 AGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAACTGTCGCTTGATGATGCGAAATGGG 322 Query 7949 TGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTC 8008 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323 TGCTCCACCCTGGCCCGGATGCTGGCTTTCATGTATTCGATGTTGATGGCCGTTTTGTTC 382 Query 8009 TTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGGCGCTCGGCGATCAGCCAGTCC 8068 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 TTGCGTGGATGCTGTTTCAAGGTTCTTACCTTGCCGGGGCGCTCGGCGATCAGCCAGTCC 442 Query 8069 ACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAG 8128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443 ACATCCACCTCGGCCAGCTCCTCGCGCTGTGGCGCCCCTTGGTAGCCGGCATCGGCTGAG 502 Query 8129 ACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCC 8188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 ACAAATTGCTCCTCTCCATGCAGCAGATTACCCAGCTGATTGAGGTCATGCTCGTTGGCC 562 Query 8189 GCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTC 8248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 563 GCGGTGGTGACCAGGCTGTGGGTCAGGCCACTCTTGGCATCGACACCAATGTGGGCCTTC 622 Query 8249 ATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGC 8308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 623 ATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGC 682 Query 8309 TCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGA 8368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 683 TCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGA 742 Query 8369 GTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCGGGCC 8428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 743 GTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCGGGCC 802 Query 8429 AGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGTGGTGCGGTCCGGCAAGGCG 8488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 803 AGTTGATGCTGCTCCAGCAGGTGGCGGAAATTCATGATGGTGGTGCGGTCCGGCAAGGCG 862 Query 8489 CTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGATTTCGTACAGAGCATCTTCC 8548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 863 CTATCCAGGGATAACCGGGCAAACAGACGCATGGAGGCGATTTCGTACAGAGCATCTTCC 922 Query 8549 ATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATGCGTAGCATGGTTTCC 8608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 923 ATCGCGCCATCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATGCGTAGCATGGTTTCC 982 Query 8609 AGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACC 8668 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 983 AGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACC 1042 Query 8669 ATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGA 8728 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 ATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGA 1102 Query 8729 CGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCT 8788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1103 CGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCT 1162 Query 8789 GTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT 8848 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1163 GTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCT 1222 Query 8849 A 8849 | Sbjct 1223 A 1223 >seq4615 Length=1197 Score = 872 bits (966), Expect = 0.0 Identities = 495/503 (98%), Gaps = 0/503 (0%) Strand=Plus/Plus Query 22626 GGTAATGACTCAAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 22685 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 135 GGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTC 194 Query 22686 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 22745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195 ATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTG 254 Query 22746 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 22805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255 CCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAG 314 Query 22806 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 22865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 CTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC 374 Query 22866 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATCGTGCGTTCACCGAATAC 22925 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 375 AAAGGGTGACAGCAGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATAC 434 Query 22926 GTGCGCAACAACCGTCTTCCGGAGCCTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGA 22985 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 435 GTGCGCAACAACCGTCTTCCGGAGACTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGA 494 Query 22986 TTTAGCCCCGACGTATCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCC 23045 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 495 TTTAGCCCCGACATAGCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCC 554 Query 23046 CGGCTGTATGCGCGAGGTTACCGACTGCGGCCTGAGTTTTTTAAATGGCGGAAAATCGTG 23105 |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct 555 CGGCTGTATGCGCGAGGTTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAATCGTG 614 Query 23106 TTGAGGCCAACGCCCATAATGCG 23128 ||||||||||||||||||||||| Sbjct 615 TTGAGGCCAACGCCCATAATGCG 637 Score = 471 bits (522), Expect = 3e-128 Identities = 263/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 23130 GCGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCG 23189 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 GCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCG 834 Query 23190 GGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGA 23249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 GGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGA 894 Query 23250 TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAG 23309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAG 954 Query 23310 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTA 23369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 955 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTA 1014 Query 23370 AATCAGTAAGTTGGCAGCATCACC 23393 |||||||||||||||||||||||| Sbjct 1015 AATCAGTAAGTTGGCAGCATCACC 1038 >seq25834 Length=293 Score = 336 bits (372), Expect = 1e-87 Identities = 219/241 (91%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 23153 ATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAA 23212 ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct 1 ATTCATGGCCATATCAATGATTTTCTGGTGCTTACCGGGCTGAGAGGCGGTGTAAGTGAA 60 Query 23213 CTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCT 23272 ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 61 CTGTAGTTGCCATGTTTTACGGCAAGGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCT 120 Query 23273 TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGA 23332 |||||||||||||||||| || |||||||| || ||||| ||||| ||||| |||| || Sbjct 121 TTTGCCGTTACGCACCACGCCTTCAGTAGCGGAGCAGGAAGGACATCTGATGGAAATGGA 180 Query 23333 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAC 23392 |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| || Sbjct 181 AGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTAC 240 Query 23393 C 23393 | Sbjct 241 C 241 >seq25588 Length=297 Score = 187 bits (206), Expect = 2e-42 Identities = 217/293 (74%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 72057 CTGGCTTCTCTTGCACGCGTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGACGAG 72116 ||||| || || | |||||||| |||||| || || || ||||| || | ||||| Sbjct 297 CTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAA 238 Query 72117 GATTGGGCGCGGGTTTCTGGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTTTTATT 72176 || |||||||| |||| ||| | ||||||||| || | || || | ||||| | ||| Sbjct 237 GACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATC 178 Query 72177 GATGACTCAAGCGCCCTGACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTTATAAA 72236 |||||||| || ||||||||| || || | ||||||||||| || ||| || Sbjct 177 GATGACTCCTCCGGCCTGACGCCAACGGAAGTGCGTTCCCGCGCACGCCGTATTGCCCGT 118 Query 72237 GAAAATGGTGGTTTGAGCATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAG 72296 ||| | || || | | | || |||||||||||||||||||| |||||||| || | | Sbjct 117 GAACACGGCGGCATCGGGCTTATCATGATCGACTACCTGCAACTGATGCGCGTACCGGCG 58 Query 72297 CTGCAAGATAACCGAACGCTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGC 72349 || |||||||| |||||||||||||| || || |||||||| ||||| || Sbjct 57 CTTTCCGATAACCGTACGCTGGAAATTGCAGAAATCTCTCGCTCGCTGAAAGC 5 >seq29063 Length=246 Score = 104 bits (114), Expect = 1e-17 Identities = 172/246 (70%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 21102 GACCCGGAGATCAGGTATATACCAAATGGCGGCGCGGTCGG-AAGACTCAGCATCGCAAC 21160 |||||||| | | || || |||||||| ||||| || | || | | || | || || Sbjct 2 GACCCGGAAGTACGCTACATGCCAAATGGTGGCGCAGTTGCCAACATTACGC-TGGCTAC 60 Query 21161 GAATGAATCATGGCGCGACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAA 21220 ||||| ||||| || || || ||| | |||||| || || |||||||| Sbjct 61 TTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAACAGACTGAATGGCACCG 120 Query 21221 AGTCGTTTTGTTCGGAAAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCA 21280 || || ||||||| ||||| || ||| | ||||| || ||| | || ||||||||||| Sbjct 121 CGTTGTGCTGTTCGGCAAACTGGCAGAAGTGGCGAGCGAATATCTGCGTAAAGGTTCTCA 180 Query 21281 GGTCTACATCGAAGGGAAACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACG 21340 ||| || |||||||| | || |||||||| ||||| ||| | ||||| || || Sbjct 181 GGTTTATATCGAAGGTCAGCTGCGTACCCGTAAATGGACCGATCAATCCGGTCAGGATCG 240 Query 21341 TTACAC 21346 ||||| Sbjct 241 CTACAC 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303101538377607