Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq35 172 7e-38 seq6 165 1e-35 seq555 147 3e-30 seq72 89.7 6e-13 seq168 87.8 2e-12 >seq35 Length=642070 Score = 172 bits (190), Expect = 7e-38 Identities = 226/311 (73%), Gaps = 8/311 (3%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||| || ||||| || | |||||||| |||||||| || || |||| Sbjct 219060 TTCATGATACAGTTGTAAATCAATTATTATCTAAAATTGATGGTGTTGATCAATTGAATA 219119 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||| | ||| | || ||||| || || | |||| | |||||||| ||||||||||||| Sbjct 219120 ATATTCTTATTATTGGAATGACAAATCGTCGTGATATGATTGATGAAGCTTTATTACGAC 219179 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 ||||||| | ||| | |||| ||||| || ||||| ||| || | || || | |||| Sbjct 219180 CTGGTCGTCTTGAAGTTCAAATTGAAATTGGTTTACCAGACGAAAATGGTCGATTACAAA 219239 Query 164963 TTTTAAAAGTTCAT-GTG---GCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTA 165018 ||||||| ||||| || | | | ||||| | ||| |||| || | ||||| Sbjct 219240 TTTTAAATATTCATACTGCACGATTACGTGAAA----ATCATAAATTAACTTCGGATGTT 219295 Query 165019 GATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTA 165078 ||||| || || | |||| ||| | ||||| |||||| || ||| | || || ||| Sbjct 219296 GATTTGAAAGAATTTGCTGAATTAACAAGAAATTTTAGTGGGGCAGAAATTGAAGGTTTA 219355 Query 165079 GTAAGAGCCGC 165089 ||| |||| || Sbjct 219356 GTACGAGCAGC 219366 >seq6 Length=1008552 Score = 165 bits (182), Expect = 1e-35 Identities = 244/345 (71%), Gaps = 8/345 (2%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||| |||||||| || | || |||||||||||||| || ||||||| Sbjct 802252 TTCATGATACAGTTGTTAATCAATTATTATCGAAAATAGATGGTGTTGATCAATTAAATA 802311 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 |||||||||| | |||||||| || || | |||| | |||||||| ||| | ||||||| Sbjct 802312 ATATTTTAATCATCGGTATGACAAATCGTCGTGATATGATTGATGAAGCTCTTTTACGAC 802371 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 |||||||| | ||| | |||| ||||| || ||||| || || | || || | |||| Sbjct 802372 CTGGTCGACTTGAAGTTCAAATTGAAATTGGTTTACCAGATGAAAATGGTCGTTTACAAA 802431 Query 164963 TTTTAAAAGTTCAT----GTGGCTAAAATGAAATCCTGTGATATATTATCTCCCGATGTA 165018 | ||||| ||||| | | | | |||| | ||| |||| | | ||||| Sbjct 802432 TCTTAAATATTCATACAAATCGTTTACGTGAA----CATAATAAATTAAATTCGGATGTT 802487 Query 165019 GATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTA 165078 || ||||| || | ||| || | ||||| |||||| |||||| |||| || ||| Sbjct 802488 GACTTAAAAGAATTTTCTGAAATGACAAGAAATTTTAGTGGAGCTGAACTAGAAGGTTTA 802547 Query 165079 GTAAGAGCCGCTCAATCAACCGCATTAAGTCGATGTGTTAAAGTA 165123 || |||| || ||| ||| | | |||| | |||||||| Sbjct 802548 GTTCGAGCTGCAATGTCATTTGCAATGAATCGACATATTAAAGTA 802592 >seq555 Length=108405 Score = 147 bits (162), Expect = 3e-30 Identities = 149/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||| || ||||| || | |||||||| |||||||| || || |||| Sbjct 83469 TTCATGATACAGTTGTAAATCAATTATTATCTAAAATTGATGGTGTTGATCAATTGAATA 83528 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||| | ||| | || ||||| || || | |||| | |||||||| ||||||||||||| Sbjct 83529 ATATTCTTATTATTGGAATGACAAATCGTCGTGATATGATTGATGAAGCTTTATTACGAC 83588 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 ||||||| | ||| | |||| ||||| || ||||| ||| || | || || | |||| Sbjct 83589 CTGGTCGTCTTGAAGTTCAAATTGAAATTGGTTTACCAGACGAAAATGGTCGATTACAAA 83648 Query 164963 TTTTAAAAGTTCAT 164976 ||||||| ||||| Sbjct 83649 TTTTAAATATTCAT 83662 >seq72 Length=498752 Score = 89.7 bits (98), Expect = 6e-13 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 19357 ACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGAT 19416 ||||||||| || ||||| || ||| || |||||||| |||||| | || Sbjct 237280 ACCTGAAATTGGAGATAAATTCAGTTCACGGCATGGACAAAAAGGTGTTTGTGGTTTAAT 237221 Query 19417 TTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTG-CCGGATCTTATTATTA 19475 | || |||||||||||||| || | | | ||||||| ||| || ||| ||||||| | Sbjct 237220 TGTTCAACAAGAAGATATGCCATTCAATGATTATGGTAT-GTGTCCAGATATTATTATGA 237162 Query 19476 ACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||||||| || ||||||||||||||| Sbjct 237161 ATCCACATGGTTATCCAAGTCGAATGAC 237134 >seq168 Length=329023 Score = 87.8 bits (96), Expect = 2e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417 |||||||| || ||||| || ||| || |||||||| |||||| | ||| Sbjct 256923 CCTGAAATTGGAGATAAATTCAGTTCACGGCATGGACAAAAAGGTGTTTGTGGTTTAATT 256864 Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTG-CCGGATCTTATTATTAA 19476 || |||||||||||||| || | | | ||||||| ||| || ||| ||||||| || Sbjct 256863 GTTCAACAAGAAGATATGCCATTCAATGATTATGGTAT-GTGTCCAGATATTATTATGAA 256805 Query 19477 CCCACATGCTTTTCCAAGTCGAATGAC 19503 ||||||| || ||||||||||||||| Sbjct 256804 TCCACATGGTTATCCAAGTCGAATGAC 256778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595602613717200