Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq389 185 1e-42 seq48 185 1e-42 seq345 174 2e-39 seq252 174 2e-39 seq381 165 1e-36 seq178 165 1e-36 seq623 161 2e-35 seq30 161 2e-35 >seq389 Length=167735 Score = 185 bits (204), Expect = 1e-42 Identities = 199/261 (76%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||| | | ||||||||||| || ||||| || || || |||||||| Sbjct 134271 GCCAAACGTCATCGTAAAGTACTTCGAGATAATATTCAAGGTATAACAAAACCAGCTATT 134330 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| ||||||| ||||||||||| || ||| | ||| || |||||||||| | Sbjct 134331 CGTCGTTTGGCTCGACGTGGTGGAGTTAAACGTATAAGTGGTTTAATCTATGAAGAAGTA 134390 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| ||||| || ||| | | | ||||| | ||||||| || || ||||| || Sbjct 134391 CGTGGTGTCTTGAAAATTTTCTTGGAAAATGTTATTCGTGATGCTGTTACA-TATACTGA 134449 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || |||||||| || || || |||||||| | |||||||| | ||||||||||| Sbjct 134450 ACATGCAAAACGTAAAACGGTTACAGCCATGGATGTTGTCTATGCTCTTAAACGTCAAGG 134509 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | ||||||||||| Sbjct 134510 TCGTACACTCTATGGTTTTGG 134530 >seq48 Length=589086 Score = 185 bits (204), Expect = 1e-42 Identities = 199/261 (76%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||| | | ||||||||||| || ||||| || || || |||||||| Sbjct 303367 GCCAAACGTCATCGTAAAGTACTTCGAGATAATATTCAAGGTATAACAAAACCAGCTATT 303426 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| ||||||| ||||||||||| || ||| | ||| || |||||||||| | Sbjct 303427 CGTCGTTTGGCTCGACGTGGTGGAGTTAAACGTATAAGTGGTTTAATCTATGAAGAAGTA 303486 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| ||||| || ||| | | | ||||| | ||||||| || || ||||| || Sbjct 303487 CGTGGTGTCTTGAAAATTTTCTTGGAAAATGTTATTCGTGATGCTGTTACA-TATACTGA 303545 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || |||||||| || || || |||||||| | |||||||| | ||||||||||| Sbjct 303546 ACATGCAAAACGTAAAACGGTTACAGCCATGGATGTTGTCTATGCTCTTAAACGTCAAGG 303605 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 |||| | ||||||||||| Sbjct 303606 TCGTACACTCTATGGTTTTGG 303626 >seq345 Length=186762 Score = 174 bits (192), Expect = 2e-39 Identities = 174/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || |||||||| || ||||| ||||| || ||||| ||||| ||| | || Sbjct 152223 AGGTATCACAAAACCAGCTATTCGCCGTCTTGCTCGACGAGGTGGTGTCAAACGTATATC 152282 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| |||||||||| |||||| |||| | || ||||| || | | |||||| | Sbjct 152283 TGGTTTGATCTATGAAGAAGTTCGTGGTGTTCTTAAAATCTTTCTTGAAAACGTTATTCG 152342 Query 16591 TGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCG 16649 ||||||| || || ||||| || |||||||||||||| ||||| || |||||||| | | Sbjct 152343 TGATGCTGTTACA-TATACAGAACACGCTAAACGTAAAACTGTTACAGCCATGGATGTTG 152401 Query 16650 TCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||||| | ||||| ||||| |||| | || ||||| || Sbjct 152402 TCTATGCCCTCAAACGACAAGGTCGTACACTCTACGGTTTCGG 152444 >seq252 Length=248232 Score = 174 bits (192), Expect = 2e-39 Identities = 174/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| || |||||||| || ||||| ||||| || ||||| ||||| ||| | || Sbjct 62370 AGGTATCACAAAACCAGCTATTCGCCGTCTTGCTCGACGAGGTGGTGTCAAACGTATATC 62311 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| |||||||||| |||||| |||| | || ||||| || | | |||||| | Sbjct 62310 TGGTTTGATCTATGAAGAAGTTCGTGGTGTTCTTAAAATCTTTCTTGAAAACGTTATTCG 62251 Query 16591 TGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCG 16649 ||||||| || || ||||| || |||||||||||||| ||||| || |||||||| | | Sbjct 62250 TGATGCTGTTACA-TATACAGAACACGCTAAACGTAAAACTGTTACAGCCATGGATGTTG 62192 Query 16650 TCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||||| | ||||| ||||| |||| | || ||||| || Sbjct 62191 TCTATGCCCTCAAACGACAAGGTCGTACACTCTACGGTTTCGG 62149 >seq381 Length=169106 Score = 165 bits (182), Expect = 1e-36 Identities = 197/262 (75%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||| | | ||||| |||||||| ||||| || ||||| |||||||| Sbjct 129332 GCCAAACGTCATCGTAAAGTACTTCGTGATAACATTCAAGGTATAACCAAACCAGCTATT 129273 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| | ||| | |||||||| ||||| ||| | || | | |||||||| | Sbjct 129272 CGTCGATTAGCTAGACGTGGTGGTGTCAAACGTATTAGCGGGCTTATTTATGAAGAAGTA 129213 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| ||||| |||||| | | | ||||| | ||||||| || || ||||| || Sbjct 129212 CGTGGTGTATTGAAAATCTTCTTAGAAAATGTTATTCGTGATGCTGTTACA-TATACTGA 129154 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || |||||||| || ||||| || | |||||| | ||||||||| | ||||| ||||| Sbjct 129153 ACATGCTAAACGAAAAACTGTTACTGCTATGGATGTTGTCTATGCACTTAAACGACAAGG 129094 Query 16672 CCGTAAGATT-TATGGTTTTGG 16692 || || ||| ||||||||||| Sbjct 129093 ACG-AACATTATATGGTTTTGG 129073 >seq178 Length=321086 Score = 165 bits (182), Expect = 1e-36 Identities = 197/262 (75%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || |||||||| | | ||||| |||||||| ||||| || ||||| |||||||| Sbjct 120733 GCCAAACGTCATCGTAAAGTACTTCGTGATAACATTCAAGGTATAACCAAACCAGCTATT 120792 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| | ||| | |||||||| ||||| ||| | || | | |||||||| | Sbjct 120793 CGTCGATTAGCTAGACGTGGTGGTGTCAAACGTATTAGCGGGCTTATTTATGAAGAAGTA 120852 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCGA 16611 |||| ||| ||||| |||||| | | | ||||| | ||||||| || || ||||| || Sbjct 120853 CGTGGTGTATTGAAAATCTTCTTAGAAAATGTTATTCGTGATGCTGTTACA-TATACTGA 120911 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || |||||||| || ||||| || | |||||| | ||||||||| | ||||| ||||| Sbjct 120912 ACATGCTAAACGAAAAACTGTTACTGCTATGGATGTTGTCTATGCACTTAAACGACAAGG 120971 Query 16672 CCGTAAGATT-TATGGTTTTGG 16692 || || ||| ||||||||||| Sbjct 120972 ACG-AACATTATATGGTTTTGG 120992 >seq623 Length=89818 Score = 161 bits (178), Expect = 2e-35 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || || |||||||| |||||| ||||||| || ||||| || || ||| || Sbjct 42711 AGGTATTACTAAACCAGCTATTCGTCGTTTGGCTCGACGAGGTGGTGTAAAACGTATCAG 42770 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| |||||||||| | |||| ||| ||||| ||||| || | | ||||| | Sbjct 42771 TGGTTTGATCTATGAAGAAGTACGTGGTGTATTGAAAATCTTTCTTGAAAATGTTATTCG 42830 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGT 16650 ||||||| | ||||| || || || |||||||| || || || | |||||| | || Sbjct 42831 TGATGCTGTAACATATACTGAACATGCAAAACGTAAAACAGTTACAGCTATGGATGTTGT 42890 Query 16651 CTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||| |||||||||||||| |||| | ||||||||||| Sbjct 42891 CTATGCTTTGAAACGTCAAGGTCGTACACTCTATGGTTTTGG 42932 >seq30 Length=674821 Score = 161 bits (178), Expect = 2e-35 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || || |||||||| |||||| ||||||| || ||||| || || ||| || Sbjct 172114 AGGTATTACTAAACCAGCTATTCGTCGTTTGGCTCGACGAGGTGGTGTAAAACGTATCAG 172173 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| |||||||||| | |||| ||| ||||| ||||| || | | ||||| | Sbjct 172174 TGGTTTGATCTATGAAGAAGTACGTGGTGTATTGAAAATCTTTCTTGAAAATGTTATTCG 172233 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGT 16650 |||||| | ||||| || || || |||||||| ||||| || | |||||| | || Sbjct 172234 CGATGCTGTAACATATACTGAACATGCAAAACGTAAAACTGTTACAGCTATGGATGTTGT 172293 Query 16651 CTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||| |||||||||||||| |||| | ||||||||||| Sbjct 172294 CTATGCTTTGAAACGTCAAGGTCGTACACTCTATGGTTTTGG 172335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79042132258731