Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq276 91.5 2e-13 seq76 91.5 2e-13 seq176 86.0 1e-11 seq8 86.0 1e-11 >seq276 Length=227470 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 194068 ATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGC 194127 || |||| | ||||||||||| ||| |||||| |||||||||||||| ||||||| | Sbjct 66519 ATTCTAAACGTGATTGGGGACATGCACGAGATTATATTGAAGCGATGTGGCTAATGTTAC 66460 Query 194128 AACAGGATGAACCCGATGATTATGTGATTGCTACAGGT 194165 |||| |||| ||| || |||| ||| ||||| || ||| Sbjct 66459 AACAAGATGTACCAGAAGATTTTGTTATTGCAACTGGT 66422 >seq76 Length=478225 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 194068 ATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGC 194127 || |||| | ||||||||||| ||| |||||| |||||||||||||| ||||||| | Sbjct 146155 ATTCTAAACGTGATTGGGGACATGCACGAGATTATATTGAAGCGATGTGGCTAATGTTAC 146096 Query 194128 AACAGGATGAACCCGATGATTATGTGATTGCTACAGGT 194165 |||| |||| ||| || |||| ||| ||||| || ||| Sbjct 146095 AACAAGATGTACCAGAAGATTTTGTTATTGCAACTGGT 146058 >seq176 Length=322550 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 194046 ATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTT 194105 || ||| | |||||| | | || | || | ||||||||||| || |||||| | Sbjct 207590 ATCCTTGAACTTGGTGCTTTAGATTCCAAACGTGATTGGGGACATGCTCGAGATTATATC 207649 Query 194106 GAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGT 194165 ||||| |||||||| ||||| ||||| ||| ||| || |||| || ||||| |||||| Sbjct 207650 GAAGCAATGTGGTTGATGTTACAACATGATACACCTGAAGATTTCGTTATTGCCACAGGT 207709 Query 194166 GAACAGTATTCTGTTAGAGACTTTGTGAATGAAGCAGC 194203 ||| || |||| |||| ||||| |||||| || Sbjct 207710 GAAACACATAGTGTTCGAGAATTTGT---TGAAGCTGC 207744 >seq8 Length=956989 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 194046 ATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTT 194105 || ||| | |||||| | | || | || | ||||||||||| || |||||| | Sbjct 309043 ATCCTTGAACTTGGTGCTTTAGATTCCAAACGTGATTGGGGACATGCTCGAGATTATATC 309102 Query 194106 GAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGT 194165 ||||| |||||||| ||||| ||||| ||| ||| || |||| || ||||| |||||| Sbjct 309103 GAAGCAATGTGGTTGATGTTACAACATGATACACCTGAAGATTTCGTTATTGCCACAGGT 309162 Query 194166 GAACAGTATTCTGTTAGAGACTTTGTGAATGAAGCAGC 194203 ||| || |||| |||| ||||| |||||| || Sbjct 309163 GAAACACATAGTGTTCGAGAATTTGT---TGAAGCTGC 309197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807190114388520