Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq1298 441 2e-119 seq29063 114 4e-21 >seq1298 Length=11968 Score = 441 bits (488), Expect = 2e-119 Identities = 299/344 (87%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 37779 AGATCTGACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 37838 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 11 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 70 Query 37839 GAATAAACCAATGGACAGAATCACAGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 37898 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 71 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 130 Query 37899 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 37958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 131 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 190 Query 37959 CGGCATGTTTGGACCAAATAAAAACATATCAGAATGGCGTATCCCTCAAAATGAGGGAAA 38018 ||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||||||| Sbjct 191 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 250 Query 38019 ANNNNNNNNNNNNNNNNNTAAAACANNNNNNNNNNNNNNNNAGTGCTATCCCTCAAAACA 38078 | ||||||| | ||||||||||||||||| Sbjct 251 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 310 Query 38079 GGGGGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 38121 |||||||||||||||||||||| ||||||||| ||| | ||||| Sbjct 311 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 353 Score = 441 bits (488), Expect = 2e-119 Identities = 299/344 (87%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 37779 AGATCTGACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 37838 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10837 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 10896 Query 37839 GAATAAACCAATGGACAGAATCACAGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 37898 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 10897 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 10956 Query 37899 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 37958 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10957 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 11016 Query 37959 CGGCATGTTTGGACCAAATAAAAACATATCAGAATGGCGTATCCCTCAAAATGAGGGAAA 38018 ||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||||||| Sbjct 11017 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 11076 Query 38019 ANNNNNNNNNNNNNNNNNTAAAACANNNNNNNNNNNNNNNNAGTGCTATCCCTCAAAACA 38078 | ||||||| | ||||||||||||||||| Sbjct 11077 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 11136 Query 38079 GGGGGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 38121 |||||||||||||||||||||| ||||||||| ||| | ||||| Sbjct 11137 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 11179 >seq29063 Length=246 Score = 114 bits (126), Expect = 4e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 32948 GTGAACCGATTCTGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGA 33007 ||| | |||| ||| || ||| || |||||| | || |||| | ||||| | | Sbjct 246 GTGTAGCGATCCTGACCGGATTGATCGGTCCATTTACGGGTACGCAGCTGACCTTCGATA 187 Query 33008 TAAACCTCAGAGCCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATC 33067 ||||||| ||| ||||| |||||||| ||||| || | |||||||||||| ||| || | Sbjct 186 TAAACCTGAGAACCTTTACGCAGATATTCGCTCGCCACTTCTGCCAGTTTGCCGAACAGC 127 Query 33068 ACCACACGGTGCCACTCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGT 33127 || || |||||||| || ||||| || || |||||| || |||||| ||||| | Sbjct 126 ACAACGCGGTGCCATTCAGTCTGTTCTTTCATCTCGCCGGTCGCTTTATCACGCCAGGAT 67 Query 33128 TCTGACGTAGC 33138 || || ||||| Sbjct 66 TCGGAAGTAGC 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149893995397748