Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq417 185 9e-42 seq83 176 5e-39 seq163 102 9e-17 seq18856 95.1 1e-14 >seq417 Length=153455 Score = 185 bits (204), Expect = 9e-42 Identities = 241/328 (73%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 |||||||||||| ||||| |||||||| || || || ||||||||||| ||||| | ||| Sbjct 94805 ACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAATCCGTAGAAACAACGTGC 94864 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || | |||||| || ||||| ||| | | || |||||| || || ||||| Sbjct 94865 TTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATTTTCACCGACAATACCATC 94924 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 ||| || |||||||| ||||| | || ||| ||||||||| |||| | ||||| Sbjct 94925 ACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATATTGTTCATCGGGAGTTAAACG 94984 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAA-AGCTAGCAA 22004 | ||||||| | ||| || | |||||| ||||||||| |||||||| || | ||| Sbjct 94985 TAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACATGTCCAAATAGATGCCAA 95044 Query 22005 TAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA-AACCTG 22063 | || |||||| | |||| ||||||| |||| |||||||||||| ||| ||| || Sbjct 95045 T-GCACGTTTATAGAATTTCCATATATCATGATATTTTATTGGAAATAGAACATAACGTG 95103 Query 22064 TT--ATTTGATTCAACTAAAAGTGGTTC 22089 | ||| |||| |||||||||||| Sbjct 95104 ATGGATT---TTCACGTAAAAGTGGTTC 95128 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/146 (76%), Gaps = 5/146 (3%) Strand=Plus/Plus Query 21495 AACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCT 21554 ||||| |||| | ||| |||||||||||| ||||||||| || ||||| | || | || Sbjct 94484 AACCT-CATCTCGACTAATTAATTCATTACTAAATGTTAAGCCAGGCATAACACCACGCT 94542 Query 21555 TTTTTAACCAAAATATTGACGCAAATG--CTCCTGAAAAGAAAATGCCCTCAACGGCAGC 21612 ||||||||| || || ||||||| | |||||| || || || ||||| ||| Sbjct 94543 CACGTAACCAAAAAATAGATGCAAATGAACCACTGAAA--AAGATTCCTTCAACACAAGC 94600 Query 21613 AAATGCAACTAATCGTTCACCGTATG 21638 |||||||||||| |||||| || ||| Sbjct 94601 AAATGCAACTAAACGTTCAGCGAATG 94626 >seq83 Length=472686 Score = 176 bits (194), Expect = 5e-39 Identities = 239/328 (73%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 |||||||||||| ||||| |||||||| || || || |||||||| || ||||| | ||| Sbjct 432762 ACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGAAATCCATAGAAACAACGTGC 432703 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || | |||||| || ||||| ||| | | || |||||| || || ||||| Sbjct 432702 TTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAATTTTCACCGACAATACCATC 432643 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 ||| || |||||||| || || | || ||| ||||||||| |||| | ||||| Sbjct 432642 ACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATATTGTTCATCGGGAGTTAAACG 432583 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAA-AGCTAGCAA 22004 | ||||||| | ||| || | |||||| ||||||||| |||||||| || | ||| Sbjct 432582 TAACCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACATGTCCAAATAGATGCCAA 432523 Query 22005 TAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA-AACCTG 22063 | || |||||| | |||| ||||||| |||| |||||||||||| ||| ||| || Sbjct 432522 T-GCACGTTTATAGAATTTCCATATATCATGATATTTTATTGGAAATAGAACATAACGTG 432464 Query 22064 TT--ATTTGATTCAACTAAAAGTGGTTC 22089 | ||| |||| |||||||||||| Sbjct 432463 ATGGATT---TTCACGTAAAAGTGGTTC 432439 Score = 102 bits (112), Expect = 9e-17 Identities = 112/146 (77%), Gaps = 5/146 (3%) Strand=Plus/Minus Query 21495 AACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCT 21554 ||||| |||| | ||| |||||||||||| |||||||||||| ||||| | || | || Sbjct 433083 AACCT-CATCTCGACTAATTAATTCATTACTAAATGTTAAACCAGGCATAACACCACGCT 433025 Query 21555 TTTTTAACCAAAATATTGACGCAAATGCTCC--TGAAAAGAAAATGCCCTCAACGGCAGC 21612 ||||||||| || || ||||||| || |||||| | || || ||||| ||| Sbjct 433024 CACGTAACCAAAAAATAGATGCAAATGAACCACTGAAAA--AGATTCCTTCAACACAAGC 432967 Query 21613 AAATGCAACTAATCGTTCACCGTATG 21638 |||||||||||| |||||| || ||| Sbjct 432966 AAATGCAACTAAACGTTCAGCGAATG 432941 >seq163 Length=332407 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| | ||| ||||||||||| |||||||||||| ||||| | || | | Sbjct 173611 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 173552 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 ||||||||| ||||| ||||||| ||| ||| || || || ||||| ||||||| Sbjct 173551 GTAACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATG 173492 Query 21618 CAACTAATCGTTCA 21631 |||||||||||||| Sbjct 173491 CAACTAATCGTTCA 173478 >seq18856 Length=423 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| | ||| ||||||||||| |||||||||||| ||||| | || | | Sbjct 198 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 257 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 ||||||||| ||||| ||||||| ||| ||| || || || ||||| ||| ||| Sbjct 258 GTAACCAAAAAATTGATGCAAATGATCCACTAAA-AAGATACCTTCAACACATGCAGATG 316 Query 21618 CAACTAATCGTTCA 21631 |||||||||||||| Sbjct 317 CAACTAATCGTTCA 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531660334297080