Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq417 201 1e-46 seq83 192 7e-44 seq15 132 6e-26 seq163 98.7 1e-15 >seq417 Length=153455 Score = 201 bits (222), Expect = 1e-46 Identities = 236/319 (74%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | || ||||| || | | |||||||||||| |||||||| |||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || ||||||||||||||||| | || || | || || ||||| ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743 | ||||||||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 33804 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATA 33863 |||||| |||||||| |||||| ||| |||||| | ||||| || |||| ||| Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 33864 TTGGATTGGGAAAATAACA 33882 || ||||| || | |||| Sbjct 95078 TTTTATTGGAAATAGAACA 95096 >seq83 Length=472686 Score = 192 bits (212), Expect = 7e-44 Identities = 234/319 (73%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | || ||||| || | | |||||||||||| |||||||| |||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || |||||||| |||||||| | || || | || || ||||| ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743 | ||||||||| || || || ||||| || |||||||| || || |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 33804 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATA 33863 |||||| |||||||| |||||| ||| |||||| | ||||| || |||| ||| Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 33864 TTGGATTGGGAAAATAACA 33882 || ||||| || | |||| Sbjct 432489 TTTTATTGGAAATAGAACA 432471 >seq15 Length=819560 Score = 132 bits (146), Expect = 6e-26 Identities = 372/565 (66%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843 ||||| | |||| ||| |||||||| || | ||| | || || || | |||| Sbjct 550420 GGATAGAAGTTAACATCAATAATTTTGTTCAAATTACGTACGATAACACTTGTTACATGA 550479 Query 62844 TTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAACATGT---TCAAG-GCAACAGA 62899 ||||| |||||||||| | |||| || |||| | | ||| |||| || Sbjct 550480 ACAAGTTTATCAAAATCAAATGTTCGATCTGG-ACGAACAAATCGATTAAGTGCAATTGA 550538 Query 62900 TGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAG 62959 ||||| ||||||||| || || ||||| | | | ||||| || || || || || | Sbjct 550539 TGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAA 550598 Query 62960 ATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTT 63019 ||| ||| | || || || | || |||||||||||| || |||||| ||| || Sbjct 550599 ATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTT 550658 Query 63020 ATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGAC 63079 ||| | |||||||| |||||||||||||| || | | | ||| || ||| | | Sbjct 550659 ATATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATC 550718 Query 63080 TCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTT 63138 | | || || ||| || | | | |||| || ||| ||| |||||| || || Sbjct 550719 TTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTT 550777 Query 63139 CGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACC 63198 |||| || | |||||||||||| | || ||||| || |||||||| || | || Sbjct 550778 CGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACATTAATGTCC 550837 Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258 | | | ||| | | | || || |||||| | ||| |||||||| | |||| ||| | Sbjct 550838 ATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAAGCTGGAAAGA 550897 Query 63259 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 63318 |||| | | | | ||| || || ||||| ||| ||| | ||| | | | Sbjct 550898 GATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAACTCAAAGA 550957 Query 63319 TATCAGAATGCCACGGTTCCAAGTA 63343 |||| | |||||| |||||||| || Sbjct 550958 TATCCGCATGCCATGGTTCCAAATA 550982 Score = 125 bits (138), Expect = 9e-24 Identities = 301/453 (66%), Gaps = 2/453 (0%) Strand=Plus/Minus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| ||||||| ||||||||| || || ||||| | | | ||||| || || || Sbjct 384302 GCAATTGATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCC 384243 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 || || | ||| ||| | || || || | || |||||||||||| || |||||| Sbjct 384242 GTACATAAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACAC 384183 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 ||| ||||| || |||||||| |||||||||||||| || | | | ||| || | Sbjct 384182 TGATCTTTATATAGCATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAAC 384123 Query 63072 CAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATA 63130 || | || | || || ||| || | | | |||| || ||| ||| |||||| Sbjct 384122 CAAAGATCTTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATA 384064 Query 63131 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 63190 || |||||| || | |||||||||||| | || ||||| || |||||||| Sbjct 384063 TAAATCTTCGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGACACAT 384004 Query 63191 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63250 || | ||| | | ||| | | | || || |||||| | ||| |||||||| | || Sbjct 384003 TAATGTCCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAGGC 383944 Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310 | ||| ||||| | | | | ||| || || ||||| ||| ||| | || Sbjct 383943 TGGAAAGAGATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAA 383884 Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343 | | ||||| | |||||| |||||||| || Sbjct 383883 TTCAAAGATATCCGCATGCCATGGTTCCAAATA 383851 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 62456 ACTATTTCTAAGACCGTAT 62474 |||||| | | ||| ||| Sbjct 384869 ACTATTACGAGTACCATAT 384851 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 62456 ACTATTTCTAAGACCGTAT 62474 |||||| | | ||| ||| Sbjct 549964 ACTATTACGAGTACCATAT 549982 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 63735 TGCTGAGGTCTTTCAACGAT 63754 || || |||| |||||| || Sbjct 383234 TGTTGTGGTCGTTCAACAAT 383215 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 63735 TGCTGAGGTCTTTCAACGAT 63754 || || |||| |||||| || Sbjct 551602 TGTTGTGGTCGTTCAACAAT 551621 Score = 82.4 bits (90), Expect = 1e-10 Identities = 132/189 (70%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 || ||| |||||| || ||||| || | ||| |||| ||||||||| || | |||| Sbjct 550142 GAACCTGGATATGTTTCATATGGACCATTAATCTTAGCTGATTCACAACTTGCTTTTAAT 550201 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||| | |||||||| |||||||| || | ||| || | ||| ||||| || || Sbjct 550202 GCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTCG 550261 Query 62688 AATGGATA----ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGAT 62743 |||||| | || || ||||| | || || | ||||||||||||||||| || Sbjct 550262 AATGGAAATCGCATCAAACAGAATGTA----TCAGCAAGACCTTGAACACCAATACCAAT 550317 Query 62744 AGGTCTATG 62752 || | ||| Sbjct 550318 TGGACGATG 550326 >seq163 Length=332407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/106 (82%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| || ||||| ||||| | ||||||||||||||||||||| |||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTC-GGTAATCTGTACTTC 33668 || ||||| || |||||||| | || || |||||| || ||||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAAT-TGAACTTC 173218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622665573357720