Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq417 226 4e-54 seq83 217 2e-51 seq15 127 3e-24 seq163 105 8e-18 >seq417 Length=153455 Score = 226 bits (250), Expect = 4e-54 Identities = 251/335 (75%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||||||||||||||| || | || || | || || ||||| ||||| |||| Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100 ||||||||||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 33221 TTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255 || |||||||| | |||| | | |||||||| Sbjct 95078 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 95112 >seq83 Length=472686 Score = 217 bits (240), Expect = 2e-51 Identities = 249/335 (74%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||| | ||||||||||| | | |||||||||||| |||||||| |||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 ||||||||||| ||||| || | || || | || || ||||| ||||| |||| Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 33041 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33100 ||||||||||| || || || ||||| || |||||||| || || |||||||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 33101 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 |||||||| ||| || || |||| |||||| | ||||| || | || ||| || Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220 |||||| |||||||| |||||| ||| |||||| | ||||| || |||||||| Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 33221 TTGAATTGGAAAAATAACAAATCTATTTGGATTTT 33255 || |||||||| | |||| | | |||||||| Sbjct 432489 TTTTATTGGAAATAGAACATAACGTGATGGATTTT 432455 >seq15 Length=819560 Score = 127 bits (140), Expect = 3e-24 Identities = 371/567 (65%), Gaps = 11/567 (2%) Strand=Plus/Plus Query 62639 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62698 ||||| | |||| ||| |||||||| || | ||| | || || || | |||| Sbjct 550420 GGATAGAAGTTAACATCAATAATTTTGTTCAAATTACGTACGATAACACTTGTTACATGA 550479 Query 62699 TTCAGTTTGAGAAAATCAAATCGCCCATCTATT---ACAAACATGTTCAATGCAACAGAT 62755 ||||| |||||||||| | |||| ||||| || | ||||| ||| Sbjct 550480 ACAAGTTTATCAAAATCAAATGTTCGATCTGGACGAACAAATCGATTAAGTGCAATTGAT 550539 Query 62756 GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 62815 |||| ||||||||| || || ||||| | | | ||||| || || || || || | | Sbjct 550540 GCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTCCGTACATAAA 550599 Query 62816 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 62875 || ||| | || || || | || |||||||||||| || |||||| ||| ||| Sbjct 550600 TTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACACTGATCTTTA 550659 Query 62876 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 62935 || | |||||||| |||||||||||||| || | | | ||| || ||| | || Sbjct 550660 TATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAACCAAAGATCT 550719 Query 62936 CGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 62994 | || || ||| || | | | | || || ||| ||| |||||| || ||| Sbjct 550720 TGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTATATAAATCTTC 550778 Query 62995 GAACTCGTCTCCCCAAACATTGTCCAGTCCAGG---ACATTCATCCGGACACATCAACGA 63051 ||| || | |||||||||||| | || | | ||||| || |||||||| || | Sbjct 550779 GAATTCTTTTCCCCAAACATTTT---GTAAATGTTTACATTGATGTGGACACATTAATGT 550835 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||| | | ||| | | | || || |||||| | ||| |||||||| | |||| ||| Sbjct 550836 CCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATAAAGCTGGAAA 550895 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | | | | ||| || || ||||| ||| ||| | ||| | | Sbjct 550896 GAGATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCAAAAACTCAAA 550955 Query 63172 AATATCAGAATGCCACGGTTCCAAGTA 63198 ||||| | |||||| |||||||| || Sbjct 550956 GATATCCGCATGCCATGGTTCCAAATA 550982 Score = 120 bits (132), Expect = 4e-22 Identities = 303/457 (66%), Gaps = 8/457 (2%) Strand=Plus/Minus Query 62746 TGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62805 ||||| ||||||| ||||||||| || || ||||| | | | ||||| || || || Sbjct 384303 TGCAATTGATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAATTTC 384244 Query 62806 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 62865 || || | ||| ||| | || || || | || |||||||||||| || ||||| Sbjct 384243 CGTACATAAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATTACA 384184 Query 62866 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 62925 | ||| ||||| || |||||||| |||||||||||||| || | | | ||| || Sbjct 384183 CTGATCTTTATATAGCATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGCAAA 384124 Query 62926 CCAGACGACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTAT 62984 ||| | || | || || ||| || | | | | || || ||| ||| ||||| Sbjct 384123 CCAAAGATCTTGTGCTTTAATTGTACGTCGTCCAAGACCTTCCT-GTTCATATTTTGTAT 384065 Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGG---ACATTCATCCGGAC 63041 | || |||||| || | |||||||||||| | || | | ||||| || |||| Sbjct 384064 ATAAATCTTCGAATTCTTTTCCCCAAACATTTT---GTAAATGTTTACATTGATGTGGAC 384008 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101 |||| || | ||| | | ||| | | | || || |||||| | ||| |||||||| | Sbjct 384007 ACATTAATGTCCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCATA 383948 Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161 ||| ||| ||||| | | | | ||| || || ||||| ||| ||| | Sbjct 383947 AGGCTGGAAAGAGATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCCA 383888 Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || | | ||||| | |||||| |||||||| || Sbjct 383887 AAAATTCAAAGATATCCGCATGCCATGGTTCCAAATA 383851 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 384989 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 384930 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 384929 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 384870 Query 62311 ACTATTTCTAAGACCGTAT 62329 |||||| | | ||| ||| Sbjct 384869 ACTATTACGAGTACCATAT 384851 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 |||||||||||| ||||| | ||| | || ||| | ||| |||||||| ||||| | Sbjct 549844 TACTTGAAATTCACCAGAAAGTACACGTCGTACGTATAAATTGCTGGTATATGGTTCAAT 549903 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || || || || || | |||||| || || || || || ||||| ||||| | |||||| Sbjct 549904 TGATTCGTTGTTACCAAGAATTTGTGCTGTAGAAGCTGTTGGCATTGGTGCTAACAATAA 549963 Query 62311 ACTATTTCTAAGACCGTAT 62329 |||||| | | ||| ||| Sbjct 549964 ACTATTACGAGTACCATAT 549982 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 383354 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 383295 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 383294 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 383235 Query 63590 TGCTGAGGTCTTTCAACGAT 63609 || || |||| |||||| || Sbjct 383234 TGTTGTGGTCGTTCAACAAT 383215 Score = 86.0 bits (94), Expect = 8e-12 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || || ||||| ||||| | |||||| |||||| ||||| || || | || ||| Sbjct 549468 GGTTCAGCAATATGAATATTTAATGATTGAGATTGATCAATGAAAGCACCACGATCAGCA 549527 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAAT 62076 ||||| || ||||| ||||||||||||||||| | |||||||| ||| | || || Sbjct 549528 GCCATGTTAATAATAACTTTTTGTGGAATTTCCCAGACTGTTTTATATAACGC-TTTGAT 549586 Query 62077 ATCTTCTGGAA 62087 || ||||||| Sbjct 549587 ATGATCTGGAA 549597 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| || | || || | || || |||||||||||||| || | || |||||| Sbjct 551482 CCTGCATTGAAAAGTGTTGGTGTTGCATGTGTAAACCATTTTTCTGATAATAAATTGTAT 551541 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 || |||||||| || ||||| || |||||| || || || |||||||| | ||| Sbjct 551542 GTTTCAATAGCACTATCAATATCTGATCCATGAATACCAACAGCAACACGCATAAGCATA 551601 Query 63590 TGCTGAGGTCTTTCAACGAT 63609 || || |||| |||||| || Sbjct 551602 TGTTGTGGTCGTTCAACAAT 551621 Score = 82.4 bits (90), Expect = 1e-10 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || || ||||| ||||| | ||||| |||||| || || || || | || ||| Sbjct 385370 GGTTCAGCAATATGAATATTTAATGATTGTGATTGATCAATAAAAGCACCACGATCAGCA 385311 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077 ||||| || ||||| ||||||||||||||||| | |||||||| | | |||||| Sbjct 385310 GCCATGTTAATAATAACTTTTTGTGGAATTTCCCAGACTGTTTTATATAATGCTTTAATA 385251 Query 62078 TCTTCTGGAA 62087 | ||||||| Sbjct 385250 TGATCTGGAA 385241 Score = 82.4 bits (90), Expect = 1e-10 Identities = 132/189 (70%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482 || ||| |||||| || ||||| || | ||| |||| ||||||||| || | |||| Sbjct 550142 GAACCTGGATATGTTTCATATGGACCATTAATCTTAGCTGATTCACAACTTGCTTTTAAT 550201 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542 ||| | |||||||| |||||||| || | ||| || | ||| ||||| || || Sbjct 550202 GCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTCG 550261 Query 62543 AATGGATA----ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 62598 |||||| | || || ||||| | || || | ||||||||||||||||| || Sbjct 550262 AATGGAAATCGCATCAAACAGAATGTA----TCAGCAAGACCTTGAACACCAATACCAAT 550317 Query 62599 AGGTCTATG 62607 || | ||| Sbjct 550318 TGGACGATG 550326 >seq163 Length=332407 Score = 105 bits (116), Expect = 8e-18 Identities = 98/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || ||||||||||| | ||||||||||||||||||||| |||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTC-GGTAATCTGTACTTCTGTACAAAATCGTT 33039 |||||||| || ||||| || | || || |||||| || ||||| | ||||| || Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAAT-TGAACTTCGGATGAAAATTTTT 173204 Query 33040 CT 33041 || Sbjct 173203 CT 173202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633345542893200