Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq417 168 7e-37 seq83 159 4e-34 seq163 93.3 5e-14 >seq417 Length=153455 Score = 168 bits (186), Expect = 7e-37 Identities = 232/319 (73%), Gaps = 4/319 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | | | ||||||||| ||||| | ||| || ||||||||||| Sbjct 94785 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 94844 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 |||||||||||||| | ||||| | || || ||||| |||||| || || | | Sbjct 94845 AATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 94904 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 |||||| ||| |||||||| ||| |||||||||||||| | ||| || ||||||| | Sbjct 94905 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGATAAAATAT 94964 Query 93542 TTCTCATC-ATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 | ||||| |||| | || |||||| | ||| || | | ||| |||||||| Sbjct 94965 TGTTCATCGGGAGTTAAACGTA-ACCAATCTCTCATATCATTGGCTAAATCAACTTCTTC 95023 Query 93601 GACA-GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAA 93659 ||| ||||||| ||||| ||| ||| || | | |||||| || ||||||| | Sbjct 95024 -ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTA 95082 Query 93660 TTGGAAATATGACAAAACG 93678 ||||||||| ||| |||| Sbjct 95083 TTGGAAATAGAACATAACG 95101 >seq83 Length=472686 Score = 159 bits (176), Expect = 4e-34 Identities = 230/319 (72%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | | | ||||||||| ||||| | ||| || ||||||||||| Sbjct 432782 ATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGCAATTTGA 432723 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 ||||| |||||||| | ||||| | || || ||||| |||||| || || | | Sbjct 432722 AATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTCAACTAAA 432663 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 |||||| ||| |||||||| ||| ||||||||||| || | ||| || ||||||| | Sbjct 432662 TTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGATAAAATAT 432603 Query 93542 TTCTCATC-ATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 | ||||| |||| | || |||||| | ||| || | | ||| |||||||| Sbjct 432602 TGTTCATCGGGAGTTAAACGTA-ACCAATCTCTCATATCATTGGCTAAATCAACTTCTTC 432544 Query 93601 GACA-GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAA 93659 ||| ||||||| ||||| ||| ||| || | | |||||| || ||||||| | Sbjct 432543 -ACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATATTTTA 432485 Query 93660 TTGGAAATATGACAAAACG 93678 ||||||||| ||| |||| Sbjct 432484 TTGGAAATAGAACATAACG 432466 >seq163 Length=332407 Score = 93.3 bits (102), Expect = 5e-14 Identities = 154/222 (69%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 |||| ||||| || || |||||||| ||||||||||| || | || || |||| Sbjct 173611 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 173552 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233 | |||||| ||||| ||||| ||| |||||| |||||||| || |||||||| Sbjct 173551 GTAACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATG 173492 Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGG 93293 | || | ||||| ||||| || | || || | ||||| | ||||||||||| Sbjct 173491 CAACTAATCGTTCAGCAAA---TGGTGTTTTTTTGTTCATCCAACGAATAGCCCAATCGG 173435 Query 93294 CTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 |||| || || | | | |||| ||| || || || |||| Sbjct 173434 CTTTCTTTTTCACATATGGTAACGTTGAAATGGCATTGAATA 173393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556609050193080