Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq397 87.8 4e-12 seq175 87.8 4e-12 seq218 86.0 1e-11 seq165 86.0 1e-11 >seq397 Length=163567 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 144675 AGCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGAC 144616 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 144615 CCCCACGTTGGGC 144603 >seq175 Length=323105 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 248228 AGCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGAC 248287 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 248288 CCCCACGTTGGGC 248300 >seq218 Length=275576 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| | Sbjct 84584 GCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGACC 84525 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 84524 CCCACGTTGGGC 84513 >seq165 Length=331862 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||| | Sbjct 283738 GCCCGGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAATGTCGTGGGTTCGACC 283679 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 283678 CCCACGTTGGGC 283667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027360511026447