Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq483 87.8 1e-12 seq919 82.4 5e-11 >seq483 Length=129801 Score = 87.8 bits (96), Expect = 1e-12 Identities = 177/256 (69%), Gaps = 14/256 (5%) Strand=Plus/Minus Query 21811 ATATTTATAAGTAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCA 21870 |||||||| | | |||| || |||||| | ||| ||| |||| | ||||| ||||| Sbjct 30051 ATATTTATCA--ACTAGT--AACATGCAAGTTTTTGTTAGAACACTCACGGGTAAAACTT 29996 Query 21871 TTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATA 21930 | || || || |||||| | | || || | | | | || | |||||| |||| Sbjct 29995 TAACTGTTGATACGGAAACTTCGGATACAATCGAAGTAGTAAAACGTAAAATTCATGATA 29936 Query 21931 AAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT- 21989 |||| ||| | || | |||||| | ||||| |||||||| |||||||| |||||| Sbjct 29935 AAGAAGGTATTTCTCCTGATCAACAGCGTCTTATTTTTGCTGGTAAACAACTTGAAGATG 29876 Query 21990 -TTAAAAACT--ATGGCCGATTACAATATTC-AGAAGGAATCTACTCTTCATATGGTATT 22045 | || ||| ||| |||||||||||| | |||||| ||| ||||| | || | Sbjct 29875 ATCGAACACTTAATG----ATTACAATATTCAACAAGGAA-GTACATTTCATCTTGTTCT 29821 Query 22046 ACGTTTACGAGGAGGA 22061 ||| | ||||| ||| Sbjct 29820 ACGCCTCCGAGGTGGA 29805 >seq919 Length=36295 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | |||||| | || |||||||| || ||| | ||| ||| | | Sbjct 21435 ATGCAAATCTTCGTCAAAACACTTACTGGCAAAACAATCACCCTCGAAGTCGAACCATCC 21494 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | | ||| |||||| || || || ||| | ||||| | Sbjct 21495 GACACAATTGAAAACGTCAAGGCCAAAATTCAAGACAAGGAAGGTATTCCACCTG---AT 21551 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| | | ||||||||||| |||||||| |||||| | ||| | |||||||| Sbjct 21552 CAACAACGTTTGATCTTTGCTGGTAAACAACTTGAAGATGGACGAACATTATCCGATTAC 21611 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||| || |||||||| || || ||| |||| | ||| | || || || Sbjct 21612 AATATCCAAAAGGAATCAACACTCCATTTGGTTCTTCGTCTTCGTGGTGG 21661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357966943848118