Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq1298 457 3e-124 >seq1298 Length=11968 Score = 457 bits (506), Expect = 3e-124 Identities = 305/344 (89%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 33778 AGATCTGACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 33837 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 11 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 70 Query 33838 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 33897 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 71 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 130 Query 33898 CAAACGGTGCAATGAGGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 33957 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 131 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 190 Query 33958 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGCGCATCCCTCAAAATGAGGGAAT 34017 ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 191 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 250 Query 34018 ATCCCTCAAAACAGGGGATAAAACANNNCTCAATTTGAGGGAGTGTNNNNNNNNNNNNNN 34077 ||||| ||||| ||||||||||| ||||| ||| |||| || Sbjct 251 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 310 Query 34078 NNNNGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 34120 |||||||||||||||||| ||||||||| ||| | ||||| Sbjct 311 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 353 Score = 457 bits (506), Expect = 3e-124 Identities = 305/344 (89%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 33778 AGATCTGACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 33837 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10837 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 10896 Query 33838 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 33897 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10897 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 10956 Query 33898 CAAACGGTGCAATGAGGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 33957 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 10957 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 11016 Query 33958 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGCGCATCCCTCAAAATGAGGGAAT 34017 ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 11017 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 11076 Query 34018 ATCCCTCAAAACAGGGGATAAAACANNNCTCAATTTGAGGGAGTGTNNNNNNNNNNNNNN 34077 ||||| ||||| ||||||||||| ||||| ||| |||| || Sbjct 11077 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 11136 Query 34078 NNNNGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 34120 |||||||||||||||||| ||||||||| ||| | ||||| Sbjct 11137 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 11179 Score = 203 bits (224), Expect = 9e-48 Identities = 288/410 (70%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 32090 ATCACCCGAATATCTCATCAGGCCATTGGCTGGCTACAACCTTACCTACAACCCTGCATT 32149 |||| || || |||| |||||||| || || || | ||| || || ||||| || Sbjct 9960 ATCAGCCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAAC 10019 Query 32150 GTTCGTTACATGGCATTATTGGGAACTGAGGGTTTAGCGGTTGTAGGAATACTTGTCCGC 32209 || || ||||| || |||||| |||| |||||||| ||||||| || || || |||| Sbjct 10020 TCTCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGC 10079 Query 32210 TGTCTTTGATGAGCTTCTTAAAAGTGAACTCATCACCACATAACCTTGCAATGCAAAAAT 32269 | || |||| || ||||| || || ||||||||||| | | || || ||||| |||| Sbjct 10080 TATCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAAT 10139 Query 32270 CGCCTGGGTCTACAGGAACTTNNNNNNNNNNNNNNATCAGCATTCCTTCAGGAAAGCTTG 32329 | ||||| || |||| | || | |||||| ||||||||||||| Sbjct 10140 CACCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTG 10199 Query 32330 GTCGTGATCCCGCTGGAGCCGTCATTGAGTGGCCTTCAACTTCAAGCCAAAAAGATGAAT 32389 | || || | ||| || ||||| || | |||||||| |||||||| || | |||| Sbjct 10200 GCTTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAAT 10259 Query 32390 CACTGGCTTTTTTGGTCGTACTAATCCAGCATTCTGCATCTCTCTCGGTGAATGTGCGAA 32449 |||||||||||||||| || || | ||| | || ||||| | | ||| || || | || Sbjct 10260 CACTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAA 10319 Query 32450 ATTCTGGTGTAAACATTCCAGCCTGAACGTGAGAGAAGAATGGGTATTCA 32499 | |||| ||||| || |||||||| ||||| || | ||||| ||| Sbjct 10320 GCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCA 10369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137470533357612