Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq679 127 5e-24 seq20 109 1e-18 seq8602 102 2e-16 seq6255 100 7e-16 seq428 91.5 3e-13 seq74 84.2 5e-11 >seq679 Length=77933 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || |||||||||| |||||||||| || || | |||||||| || || Sbjct 32871 TGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTTAATGTGCGACCATCTTCGAGTTGT 32812 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || |||||||||||||| || || || || || ||| |||||| || || ||||| Sbjct 32811 TTGCCGGCGAAGATGAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTGTCTTGGATCTTG 32752 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| ||||| || || ||| ||| || ||||| ||||| || || || || Sbjct 32751 GCCTTGACGTTTTCGATAGTATCACTTGGTTCCACTTCCAAAGTGATGGTTTTGCCGGTC 32692 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| Sbjct 32691 AGAGTTTTGACGAAAATTTG 32672 >seq20 Length=760496 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || |||||||||| || |||||| || || | || ||||| || ||| Sbjct 309304 TGAAGTGTTGATTCCTTTTGGATATTATAGTCACTTAATGTGCGACCGTCTTCGAGTTGC 309363 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| ||||| || || || || || || ||| |||||| || || ||||| Sbjct 309364 TTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATCTTG 309423 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| ||||| || || ||| ||| || || | ||||| || ||||| ||| Sbjct 309424 GCCTTGACGTTTTCGATAGTATCACTTGGTTCCACTTCGAGAGTGATGGTTTTACCGGTG 309483 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| Sbjct 309484 AGAGTTTTGACGAAAATTTG 309503 >seq8602 Length=785 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || |||||||||| |||||||||| || || | |||||||| || || Sbjct 179 TGAAGTGTTGATTCCTTTTGGATGTTGTAGTCACTTAATGTGCGACCATCTTCGAGTTGT 120 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || |||||||||||||| || || || || || ||| |||||| || || ||||| Sbjct 119 TTGCCGGCGAAGATGAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTGTCTTGGATCTTG 60 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| ||||| || || ||| ||| || ||||| ||||| || || || || Sbjct 59 GCCTTGACGCTTTCGATAGTATCACTTGGTTCCACTTCCAAAGTGATGGTTTTGCCGGT 1 >seq6255 Length=968 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || || |||||||||| || ||||| || || | || ||||| || || Sbjct 327 TGAAGTGTTGATTCCTTTTGGATATTATAGTCGCTTAATGTGCGACCGTCTTCGAGTTGT 268 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||| ||||| || || || || || || ||| |||||| || || ||||| Sbjct 267 TTGCCGGCAAAGATAAGGCGTTGTTGATCTGGTGGAATGCCTTCTTTATCTTGGATCTTG 208 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| ||||| || || ||| ||| || || | ||||| || ||||| ||| Sbjct 207 GCCTTGACGTTTTCGATAGTATCACTTGGTTCCACTTCGAGAGTGATGGTTTTACCGGTG 148 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| Sbjct 147 AGAGTTTTGACGAAAATTTG 128 >seq428 Length=150363 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | |||||||||| || |||| || ||||| || || || ||||| ||| Sbjct 127982 TCCTTTTGAATGTTGTAGTCACTTAACGTCCGACCGTCTTCGAGTTGTTTACCGGCAAAG 127923 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TTCACGGA 199557 |||||||| || || || || ||||||||| || ||||| ||| || || ||| Sbjct 127922 ATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTATCTTGAAT-TTTAGCTTTAACGTT 127864 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| | | || || || | || || || ||||| || | ||||| || Sbjct 127863 TTCGATTGTGTCACTGGGCTCAACTTCGAGTGTAATTGTTTTACCAGTTAAGGTTTTAAC 127804 Query 199618 AAAAATTTG 199626 ||||| || Sbjct 127803 GAAAATCTG 127795 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | |||||||||| || || | || ||||| || || || ||||| ||| Sbjct 127298 TCCTTTTGAATGTTGTAGTCACTTAACGTTCGACCGTCTTCGAGTTGTTTACCGGCAAAG 127239 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TTCACGGA 199557 |||||||| || || || || ||||||||| || ||||| ||| || || ||| Sbjct 127238 ATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTATCTTGAAT-TTTAGCTTTAACGTT 127180 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 ||||| ||||| | | || || || | || || || ||||| || | ||||| || Sbjct 127179 TTCGATTGTGTCACTGGGCTCAACTTCGAGTGTAATTGTTTTACCAGTTAAGGTTTTAAC 127120 Query 199618 AAAAATTTG 199626 ||||| || Sbjct 127119 GAAAATCTG 127111 >seq74 Length=489428 Score = 84.2 bits (92), Expect = 5e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || || || || || | ||||| || | | || | |||||| Sbjct 213961 AGAACAAGATGAAGTGTAGATTCTTTCTGAATATTGTAATCGGTGAGTGTACGACCATCT 213902 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || ||||| || || || | ||| || || || || ||| |||||| | || Sbjct 213901 TCAAGTTGTTTTCCAGCAAAAATCATACGTTGTTGATCAGGTGGAATGCCTTCTTGATCT 213842 Query 199538 TGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| |||| ||| ||||| || || | || || || || | || ||||| Sbjct 213841 TGAAT-TTTAGCTTTTACGTCTTCGATGGATTCCGATGGATCAACTTCGATAGTAATCGT 213783 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || |||||||| | ||||| || Sbjct 213782 CTTACCGGTTAGAGTTTTAATGAAAATCTG 213753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178375299888189