Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq306 93.3 5e-14 seq418 87.8 2e-12 seq140 84.2 3e-11 seq106 84.2 3e-11 >seq306 Length=206829 Score = 93.3 bits (102), Expect = 5e-14 Identities = 192/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 168436 TAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCATCCTTACCACCCATGAGA-CGCGTA 168494 ||||| ||||||||| || | | || ||||| ||||||| ||| | || ||| Sbjct 124287 TAAGTCGTGTGAAAATATAACGTGCAGAAGCTGCATCACTACCACC-ATGTAATCGTGTA 124229 Query 168495 CCAAATTGACCACACGGTTCAAGAAGGTTAATGTTGTTTGAACCCGTGTAGTCGTTTGCC 168554 |||||||||||| ||| |||||| ||||| || |||||||| ||| | ||| Sbjct 124228 CCAAATTGACCAGCTGGTACAAGAAAATTAATATTATTTGAACCAACAAAGTTTTGTGCA 124169 Query 168555 A-ACTTAACAATCGTGTCCGCTAAGGATACTTCACCATGGTGGTACGCAGACTTGTCCGC 168613 | || | ||||| || | | ||| ||| ||||||||| || || ||||| || || || Sbjct 124168 AGACCT-ACAATTGTATTGGTTAATGATTGTTCACCATGATGATAAGCAGAATTTTCAGC 124110 Query 168614 GACATATGCCGCC-AGTTGTGCCACCTTCATTTCATCCTTGAGATTCTTATGGAAGCAAG 168672 || | |||| || | |||||| || || |||||| | | ||| || ||| ||| Sbjct 124109 TAC-TTTGCCACCTAATTGTGCGACTTTAATTTCACGTATTAAATTTTTCGTGAAACAAA 124051 Query 168673 CATACATCACTTTCCTCTGTGAAGGCTTGAGACCATCC 168710 || |||| | ||| | || || || ||||||||| Sbjct 124050 CAAACATGATTTTACGTTGACCTGGTTTAAGACCATCC 124013 >seq418 Length=152709 Score = 87.8 bits (96), Expect = 2e-12 Identities = 191/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 168436 TAAGTTTTGTGAAAATGTACCTCGTCTGAGAAGCATCCTTACCACCCATGAGA-CGCGTA 168494 ||||| ||||||||| || | | || ||||| ||||||| ||| | || ||| Sbjct 23797 TAAGTCGTGTGAAAATATAACGTGCAGAAGCTGCATCACTACCACC-ATGTAATCGTGTA 23739 Query 168495 CCAAATTGACCACACGGTTCAAGAAGGTTAATGTTGTTTGAACCCGTGTAGTCGTTTGCC 168554 |||||||||||| ||| |||||| ||||| || |||||||| ||| | ||| Sbjct 23738 CCAAATTGACCAGCTGGTACAAGAAAATTAATATTATTTGAACCAACAAAGTTTTGTGCA 23679 Query 168555 A-ACTTAACAATCGTGTCCGCTAAGGATACTTCACCATGGTGGTACGCAGACTTGTCCGC 168613 | || | ||||| || | | ||| ||| ||||||||| || || ||||| || || || Sbjct 23678 AGACCT-ACAATTGTATTGGTTAATGATTGTTCACCATGATGATAAGCAGAATTTTCAGC 23620 Query 168614 GACATATGCCGCC-AGTTGTGCCACCTTCATTTCATCCTTGAGATTCTTATGGAAGCAAG 168672 || | |||| || | |||||| || || |||||| | | ||| || || ||| Sbjct 23619 TAC-TTTGCCACCTAATTGTGCGACTTTAATTTCACGTATTAAATTTTTCGTAAAACAAA 23561 Query 168673 CATACATCACTTTCCTCTGTGAAGGCTTGAGACCATCC 168710 || |||| | ||| | || || || ||||||||| Sbjct 23560 CAAACATGATTTTACGTTGACCTGGTTTAAGACCATCC 23523 >seq140 Length=369268 Score = 84.2 bits (92), Expect = 3e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 25591 GACACAGGGGTACTTAGACCAACAAATCCATATTCAGCATCAAAAGCGGCGGCCGAAATG 25650 || |||| ||||||| ||||||||||||||| |||| |||| || || || ||| | Sbjct 192408 GAAACAGCTGTACTTAATCCAACAAATCCATATGCAGCTACAAAGGCAGCTGCTGAATTT 192349 Query 25651 ATAGTCCGTTCATATATAGAATCATTTGATATGAATAT-CAAAATAATTCGCTGTAATAA 25709 | || |||||| ||| ||| | || | || | ||||| || ||||||| Sbjct 192348 CTTGTTAAATCATATGGTGAAAGTTTTAA-ATTACCATACGTAATAACACGTGGTAATAA 192290 Query 25710 TGTTTATGGTCCAAATCAATACCCGGAGAAACTCATTCCAAAGTTTATAA 25759 |||||||||||| |||||| | |||| ||| | |||||| ||||||| Sbjct 192289 TGTTTATGGTCCGTATCAATTCACGGAAAAAGTTATTCCACGTTTTATAA 192240 >seq106 Length=426470 Score = 84.2 bits (92), Expect = 3e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 25591 GACACAGGGGTACTTAGACCAACAAATCCATATTCAGCATCAAAAGCGGCGGCCGAAATG 25650 || |||| ||||||| ||||||||||||||| |||| |||| || || || ||| | Sbjct 353311 GAAACAGCTGTACTTAATCCAACAAATCCATATGCAGCTACAAAGGCAGCTGCTGAATTT 353370 Query 25651 ATAGTCCGTTCATATATAGAATCATTTGATATGAATAT-CAAAATAATTCGCTGTAATAA 25709 | || |||||| ||| ||| | || | || | ||||| || ||||||| Sbjct 353371 CTTGTGAAATCATATGGTGAAAGTTTTAA-ATTACCATACGTAATAACACGTGGTAATAA 353429 Query 25710 TGTTTATGGTCCAAATCAATACCCGGAGAAACTCATTCCAAAGTTTATAA 25759 |||||||||||| |||||| | |||| ||| | |||||| ||||||| Sbjct 353430 TGTTTATGGTCCGTATCAATTCACGGAAAAAGTTATTCCACGTTTTATAA 353479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589714077055080