Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq83 219 5e-52 seq417 215 6e-51 seq163 134 2e-26 seq11526 93.3 5e-14 seq105 93.3 5e-14 seq59 89.7 6e-13 >seq83 Length=472686 Score = 219 bits (242), Expect = 5e-52 Identities = 237/314 (75%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || || |||||||| ||||||||||||||||| || |||||||||||||| || Sbjct 432789 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 432730 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || ||||| ||||| ||||| | ||||||| || |||||| || |||| | Sbjct 432729 AATTTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 432670 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | |||| |||||| || || |||||||| || ||||| ||||| | |||| ||| || Sbjct 432669 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCTAAGACATGTTTGAT 432610 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAAC 37678 ||||| | |||||| | ||| | |||||| | ||||| || | ||||||||| Sbjct 432609 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 432550 Query 37679 TTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATG 37738 ||| ||| ||||||| | |||||||||||||||||| | |||| ||||||| || Sbjct 432549 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 432490 Query 37739 TTGTATTGGAAATA 37752 || ||||||||||| Sbjct 432489 TTTTATTGGAAATA 432476 >seq417 Length=153455 Score = 215 bits (238), Expect = 6e-51 Identities = 236/314 (75%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || || |||||||| ||||||||||||||||| || |||||||||||||| || Sbjct 94778 ATCTTTGATGTATGTATCAATAAGTAAACTATACATTTCTGAATGAATATTTTCAATTGC 94837 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558 || ||||| || || ||||| | ||||||| || |||||| || |||| | Sbjct 94838 AATTTGAAATCCGTAGAAACAACGTGCTTCAGGTATTTGAACTTCACCGGAAAATTGTTC 94897 Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618 | |||| |||||| || || |||||||| || ||||| ||||| | |||| ||| || Sbjct 94898 AACTAAATTTTCACCGACAATACCATCACTTGCAGCAAAAAAAGCCAAGACATGTTTGAT 94957 Query 37619 AAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAAC 37678 ||||| | |||||| | ||| | |||||| | ||||| || | ||||||||| Sbjct 94958 AAAATATTGTTCATCGGGAGTTAAACGTAACCAATCTCTCATATCATTGGCTAAATCAAC 95017 Query 37679 TTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATG 37738 ||| ||| ||||||| | |||||||||||||||||| | |||| ||||||| || Sbjct 95018 TTCTTCACATGTCCAAATAGATGCCAATGCACGTTTATAGAATTTCCATATATCATGATA 95077 Query 37739 TTGTATTGGAAATA 37752 || ||||||||||| Sbjct 95078 TTTTATTGGAAATA 95091 >seq163 Length=332407 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 37561 CTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAA 37620 |||| ||||| ||| || ||||| || ||||||||||| || | |||| ||| |||| Sbjct 173130 CTAAATTTTCTCCAACAATTCCATCGCTTGCTGCAAAGAAGGCTAAGACATTTTTGATAA 173071 Query 37621 AATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTT 37680 ||| | ||||||| | ||| ||| ||||||| || ||||| |||| ||||||||||| Sbjct 173070 AATATTGTTCATCAGACGTTAAATTTATCCAATCTTTCATATCATTTGCTAAATCAACTT 173011 Query 37681 CATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTT 37740 | ||| ||||||| | ||| |||||||||||||| |||| |||||| || | Sbjct 173010 CTTCACATGTCCAAACAGATGCTAATGCACGTTTATAATAATTCCATATATCAGGATATC 172951 Query 37741 GTATTGGAAATA 37752 ||| ||||||| Sbjct 172950 TTATGGGAAATA 172939 Score = 120 bits (132), Expect = 4e-22 Identities = 90/106 (85%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || || |||||||| | ||||||||||||||| || |||||||||||||| || Sbjct 173322 ATCTTTAATGTACGTATCAATCAATAAACTATACATTTCCGAATGAATATTTTCAATTGC 173263 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCG 37544 ||| ||||||||||| ||||| | ||||||| ||||||||| ||| Sbjct 173262 TATTTGAAAACCATAGAAACAACGTGCTTCAGGTAATTGAACTTCG 173217 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 ||||||||| ||| || |||||||| ||| ||||| || ||||| | ||| | || Sbjct 173611 CTTCATCTCGACTGATTAATTCATTGCTAAATGTTAAACCAGGCATCACACCACGTTCAC 173552 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | |||||| |||| |||||| |||||| ||| || ||||||||||| |||||||| Sbjct 173551 GTAACCAAAAAATTGATGCAAATGATCCACTAAAAAAGATACCTTCAACACATGCAAATG 173492 Query 37318 CTAC 37321 | || Sbjct 173491 CAAC 173488 >seq11526 Length=655 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGC 37708 |||||| | ||||| || | |||||||||||| ||| ||||||| | ||||||||| Sbjct 648 CCAATCTCTCATATCATTGGCTAAATCAACTTCTTCACATGTCCAAATAGATGCCAATGC 589 Query 37709 ACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATA 37752 ||||||||| | |||| ||||||| || || ||||||||||| Sbjct 588 ACGTTTATAGAATTTCCATATATCATGATATTTTATTGGAAATA 545 >seq105 Length=427558 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 142659 ATATGATAAAAATCAGTAAAAATAAAGATAAAATACCAACATGGTTAAATATTAACAGTA 142718 |||| | |||||| ||||||| || |||| |||| ||||| ||||||| | || Sbjct 90306 ATATAACAAAAATTTCTAAAAATCCTAATCAAATTCCAAAATGGTGCAATATTAGCCGTG 90365 Query 142719 TACATTATCCAGATTTTATTGTTAATAATCCAAAAACATCACCTGTTTGGGAAATA 142774 || | ||||||||| ||||| | | ||||||||| ||||||||||||||||||| Sbjct 90366 AACTTGTTCCAGATTTCATTGTAATTGATCCAAAAAAATCACCTGTTTGGGAAATA 90421 >seq59 Length=539912 Score = 89.7 bits (98), Expect = 6e-13 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 142659 ATATGATAAAAATCAGTAAAAATAAAGATAAAATACCAACATGGTTAAATATTAACAGTA 142718 |||| | |||||| ||||||| || |||| |||| ||||| ||||||| || Sbjct 308997 ATATAACAAAAATTTCTAAAAATCCTAATCAAATTCCAAAATGGTGCAATATTAGTCGTG 308938 Query 142719 TACATTATCCAGATTTTATTGTTAATAATCCAAAAACATCACCTGTTTGGGAAATATCCG 142778 || | ||||||||| ||||| | | ||||||||| ||||||||||||||||||| | | Sbjct 308937 AACTTGTTCCAGATTTCATTGTAATTGATCCAAAAAAATCACCTGTTTGGGAAATAACTG 308878 Query 142779 GATATGAATTT 142789 |||| |||| Sbjct 308877 --TATGGATTT 308869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592049020978680