Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_017985.1 Length=40128 Score E Sequences producing significant alignments: (Bits) Value seq1298 185 2e-42 >seq1298 Length=11968 Score = 185 bits (204), Expect = 2e-42 Identities = 247/348 (71%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 11542 TCGTTACATGGCATTATTGGGAACTGAGGGTTTAGCGGTTGTAGGAATACTTGTCCGCTG 11601 || || ||||| || |||||| |||| |||||||| ||||||| || || || ||||| Sbjct 10022 TCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTA 10081 Query 11602 TCTTTGATGAGCTTCTTAAAAGTGAACTCATCACCACATAACCTTGCAATGCAAAAATCG 11661 || |||| || ||||| || || ||||||||||| | | || || ||||| ||||| Sbjct 10082 TCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCA 10141 Query 11662 CCTGGGTCTACAGGAACTTNNNNNNNNNNNNNNATCAGCATTCCTTCAGGAAAGCTTGGT 11721 ||||| || |||| | || | |||||| |||||||||||||| Sbjct 10142 CCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGC 10201 Query 11722 CGTGATCCCGCTGGAGCCGTCATTGAGTGGCCTTCAACTTCAAGCCAAAAAGATGAATCA 11781 || || | ||| || ||||| || | |||||||| |||||||| || | |||||| Sbjct 10202 TTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCA 10261 Query 11782 CTGGCTTTTTTGGTCGTACTAATCCAGCATTCTGCATCTCTCTCGGTGAATGTGCGAAAT 11841 |||||||||||||| || || | ||| | || ||||| | | ||| || || | || Sbjct 10262 CTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGC 10321 Query 11842 TCTGGTGTAAACATTCCAGCCTGAACGTGAGAGAAGAATGGGTATTCA 11889 | |||| ||||| || |||||||| ||||| || | ||||| ||| Sbjct 10322 TTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCA 10369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128232902468860