Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq1298 453 4e-123 >seq1298 Length=11968 Score = 453 bits (502), Expect = 4e-123 Identities = 305/344 (89%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 38107 AGATCTAACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 38166 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 11 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 70 Query 38167 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 38226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 71 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 130 Query 38227 CAAACGGTGCAATGAGGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 38286 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 131 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 190 Query 38287 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGAGTATCCCCCAAAATGAGGGAAT 38346 ||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| Sbjct 191 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 250 Query 38347 ACCCCTCAAAACAGGGGATAAAACATCCCTCAATTTGAGGGAGTGTTNNNNNNNNNNNNN 38406 | ||| ||||| ||||||||||||||||||| ||| |||| || | Sbjct 251 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 310 Query 38407 NNNNGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 38449 |||||||||||||||||| ||||||||| ||| | ||||| Sbjct 311 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 353 Score = 453 bits (502), Expect = 4e-123 Identities = 305/344 (89%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 38107 AGATCTAACCAAGCGACATTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 38166 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10837 AGATCTGACCAAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTG 10896 Query 38167 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCCGT 38226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10897 GAATAAACCAATGGACAGAATCACCGATTCTCAACTTAGCGAGATTACAAAGTTACCTGT 10956 Query 38227 CAAACGGTGCAATGAGGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 38286 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 10957 CAAACGGTGCAATGAAGCCAAGTTAGAACTCGTCAGAATGAATATTATCAAGCAGCAAGG 11016 Query 38287 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGAGTATCCCCCAAAATGAGGGAAT 38346 ||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||| Sbjct 11017 CGGCATGTTTGGACCAAATAAAAACATCTCAGAATGGTGCATCCCTCAAAACGAGGGAAA 11076 Query 38347 ACCCCTCAAAACAGGGGATAAAACATCCCTCAATTTGAGGGAGTGTTNNNNNNNNNNNNN 38406 | ||| ||||| ||||||||||||||||||| ||| |||| || | Sbjct 11077 ATCCCCTAAAACGAGGGATAAAACATCCCTCAAATTGGGGGATTGCTATCCCTCAAAACA 11136 Query 38407 NNNNGACACAAAAGACACTATT-CAAAAGAAAGAAATACAAGAT 38449 |||||||||||||||||| ||||||||| ||| | ||||| Sbjct 11137 GGGGGACACAAAAGACACTATTACAAAAGAAA-AAAGAAAAGAT 11179 Score = 226 bits (250), Expect = 9e-55 Identities = 256/348 (74%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 36481 TCGTTACATGGCATTATTGGGAATTGAGGGTTTAGCGGTTGTAAGAATACTTGTCCGCTG 36540 || || ||||| || |||||| | || |||||||| |||||||| || || || ||||| Sbjct 10022 TCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTA 10081 Query 36541 TCTTTGATGAGCTTCTTAAAAGTGAACTCATCACCACATAACCTTGCAATACAAAAATCG 36600 || |||| || ||||| || || ||||||||||| | | || || || || ||||| Sbjct 10082 TCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCA 10141 Query 36601 CCTGGGTCTACAGGATNNNNNNNNNNNNNNNGAATCAGCATTCCTTCAGGAAAGCTTGGT 36660 ||||| || |||| | |||| | |||||| |||||||||||||| Sbjct 10142 CCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGC 10201 Query 36661 CGTGATCCCGCTGGAGCCGTCATTGAGTGGCCTTCAACTTCAAGCCAGAAAGCTGCCTCA 36720 || || | ||| || ||||| || | |||||||| ||||||||||| || | ||| Sbjct 10202 TTGGAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCA 10261 Query 36721 CTGGCCTTTTTGGTTGTGCTTACCCATCCCTCAGCATCTCGTTGAGTGAAGGTTCGAAAT 36780 ||||| |||||||||||||||||||||| ||| ||||| | || || ||||||| || Sbjct 10262 CTGGCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGC 10321 Query 36781 TCTGGTGTAAACATTCCAGCCTGAACATGAGAGAAGAATGGGTATTCA 36828 | |||| ||||| || |||||||||||||| || | ||||| ||| Sbjct 10322 TTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCA 10369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156982149847012