Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq62 111 4e-19 seq39 105 2e-17 >seq62 Length=528316 Score = 111 bits (122), Expect = 4e-19 Identities = 324/488 (66%), Gaps = 27/488 (6%) Strand=Plus/Plus Query 133902 GATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAAC 133961 |||| |||| | |||| ||||||| |||| |||| ||||||||||||| | || Sbjct 419236 GATT-AAAACTGATCCAAATTCTCGTCGTCTACTTCTTTGTGCATGGAATGTTAATCAAT 419294 Query 133962 TAGATAAAATGACTTTGCCACCATGTCATTGCTTTA-GTCAATTC-----TTCGTAAATG 134015 || | ||||| | | |||||||||||| | | || ||||||| ||| | | | Sbjct 419295 TATCTGAAATGGCACTTCCACCATGTCAT-GTTCTATGTCAATTTAATGTTTCATCATCG 419353 Query 134016 ACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTAT-TCTTAGGAGTACCA 134074 | | | ||||| ||| | | | ||||||| |||||| || |||| || |||||| Sbjct 419354 AATGAA--TTATCTTGTTTGATGTTTCAACGTTCATGTGATTTAGGTCTT-GGTGTACCA 419410 Query 134075 TTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAA 134134 ||||| ||||| || ||||| ||||| ||| ||||| | ||||| || ||| ||| | Sbjct 419411 TTCAATATTGCATCGTATTCTTTACTTACTTATATGATTGCACATGTATGTAATTTAACA 419470 Query 134135 GTTGGTGAGTTTGT---ATGGATGGGTGGAGATGTTCACATTTATAAAAATCACGTAGAA 134191 ||||| ||| | | |||||| |||| || |||| ||||| | ||| Sbjct 419471 CCAGGTGATTTTATTTATTCTATGGGT---GATGCACATGTTTACCTTAATCATATTGAA 419527 Query 134192 GCAGTTCAGGAACAACTTTCACGTGAACCTAAAGAATTACCAACTCTTTGGATTGATACT 134251 | | | |||||| || ||||||||| | ||| ||||| | |||| || | Sbjct 419528 CCTTTACTTGAACAAATTGAACGTGAACCACGAACATTTCCAACATTAACAATTGTTAAT 419587 Query 134252 AGTATTACTGATATTAAAGATTTCACAATGGAATCTTTTAAATTGGAAAATTATAATCCA 134311 | |||| || | ||||| | | | || ||| |||||||| |||||| ||| Sbjct 419588 AAACGTACTTCAATCGATGATTTTAAAGTTGATGATTTCAAATTGGATAATTATTTACCA 419647 Query 134312 GATGCAACCATCAAAGCACCGATGGCAGTATaaaaaataaaaaGGAGCCATTGGCTCCtt 134371 ||| | | || ||| | ||||| |||| ||| | ||||| ||| || ||| Sbjct 419648 TATGGACCAATTAAAATGCAAATGGCTGTAT--AAACTCAAAAG-----ATT--CTTCTT 419698 Query 134372 tttttATT 134379 |||||||| Sbjct 419699 TTTTTATT 419706 >seq39 Length=615610 Score = 105 bits (116), Expect = 2e-17 Identities = 301/454 (66%), Gaps = 18/454 (4%) Strand=Plus/Plus Query 133902 GATTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAAC 133961 |||| |||| | |||| ||||||| |||| |||| ||||||||||||| | || Sbjct 222619 GATT-AAAACTGATCCAAATTCTCGTCGTCTACTTCTTTGTGCATGGAATGTTAATCAAT 222677 Query 133962 TAGATAAAATGACTTTGCCACCATGTCATTGCTTTA-GTCAATTC-----TTCGTAAATG 134015 || | ||||| | | |||||||||||| | | || ||||||| ||| | | | Sbjct 222678 TATCTGAAATGGCACTTCCACCATGTCAT-GTTCTATGTCAATTTAATGTTTCATCATCG 222736 Query 134016 ACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTAT-TCTTAGGAGTACCA 134074 | | | ||||| ||| | | | ||||||| |||||| || |||| || |||||| Sbjct 222737 AATGAA--TTATCTTGTTTGATGTTTCAACGTTCATGTGATTTAGGTCTT-GGTGTACCA 222793 Query 134075 TTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAA 134134 ||||| ||||| || ||||| ||||| ||| ||||| | ||||| || ||| ||| | Sbjct 222794 TTCAATATTGCATCGTATTCTTTACTTACTTATATGATTGCACATGTATGTAATTTAACA 222853 Query 134135 GTTGGTGAGTTTGT---ATGGATGGGTGGAGATGTTCACATTTATAAAAATCACGTAGAA 134191 ||||| ||| | | |||||| |||| || |||| ||||| | ||| Sbjct 222854 CCAGGTGATTTTATTTATTCTATGGGT---GATGCACATGTTTACCTTAATCATATTGAA 222910 Query 134192 GCAGTTCAGGAACAACTTTCACGTGAACCTAAAGAATTACCAACTCTTTGGATTGATACT 134251 | | | |||||| || ||||||||| | ||| ||||| | |||| || | Sbjct 222911 CCTTTACTTGAACAAATTGAACGTGAACCACGAACATTTCCAACATTAACAATTGTTAAT 222970 Query 134252 AGTATTACTGATATTAAAGATTTCACAATGGAATCTTTTAAATTGGAAAATTATAATCCA 134311 | ||| || | ||||| | | | || ||| |||||||| |||||| ||| Sbjct 222971 AAACGGACTTCAATCGATGATTTTAAAGTTGATGATTTCAAATTGGATAATTATTTACCA 223030 Query 134312 GATGCAACCATCAAAGCACCGATGGCAGTATaaa 134345 ||| | | || ||| | ||||| ||||||| Sbjct 223031 TATGGACCAATTAAAATGCAAATGGCTGTATAAA 223064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147058618443166