Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq215 138 2e-27 seq10 125 1e-23 >seq215 Length=277130 Score = 138 bits (152), Expect = 2e-27 Identities = 397/606 (66%), Gaps = 20/606 (3%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 ||||| |||||| | ||||| || | || || || || |||| || || | | || Sbjct 175971 AAAGGTATTATTCTTGCAGGAGGTTTAGGTACTCGTTTATATCCTTTAACAAAAGTTTTT 175912 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 || ||||| ||||||||| | || |||||||||||||||| |||||||| | || || Sbjct 175911 TCTAAACATTTATTACCTATTTATAATAAACCAATGATTTATTATCCATT---ATCTGTT 175855 Query 139559 ATCGAAGCTGGTATAAAC----GAAATACTTATAATATCAACACCACAGGATAGAAATTC 139614 | || | || || || |||||| | || ||| |||| | | ||| ||| Sbjct 175854 TT-GATGATGATAGGAATTCGAGAAATATTGATTATAACAACGAAAGAAGATTATTATTT 175796 Query 139615 TTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCA 139674 || || || ||| ||| || || ||||||||| | | |||| | || Sbjct 175795 ATTTGAAAAATTATTAGAAAATGGAAATCAATTTGGTTGTCATTTTCAATATCAAATACA 175736 Query 139675 AGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATC 139734 | | |||| ||||| | || ||||| || || | | ||||||||| || || Sbjct 175735 AAATCAACCGAATGGAATTGCTCAAGCATTTATTCTTGCTGAAGAATTTCTACAAAATGA 175676 Query 139735 TAAAGTAGCTCTGATTTTAGGTGACAAC--ATTTTC-CATGCTTCTAATATAGATAGATT 139791 ||||| || ||||| | ||||| || ||||| |||| | | | | | ||| Sbjct 175675 CAAAGTTGCATTGATTCTTGGTGATAATCTATTTTATCATGAATATCTTTCACAACAATT 175616 Query 139792 ACTTATGGAAGCTAATATGTCTG---ATAAAAATACGATATTTGCATATCGTGTAAATGA 139848 || |||| |||| || || | | |||||||| ||| || | ||| Sbjct 175615 AC------AAGCATTTATGAATGTAGATGGAGCTTGTATATTTGCTTATGAAGTCACTGA 175562 Query 139849 TCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGA 139908 |||| | | |||||| | ||||| | |||||| || || | | |||| || ||||| Sbjct 175561 TCCTTATCGTTATGGTATTATTGAACTTGATGAAAATAATCAACCGATTTCCATTGAAGA 175502 Query 139909 AAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGA 139968 |||||||| || || ||||||||| | ||| || | || || ||||| ||| |||| || Sbjct 175501 AAAACCTTGTAAACCAAAATCTAATAAAGCAATAACTGGTTTGTATTTTTATGATAATGA 175442 Query 139969 TGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGA 140028 ||| || || | || || || | ||| || | ||| || ||||| |||||| | || Sbjct 175441 TGTGATTCAAATTGCAAAAACACTTCGACCGTCCGATCGAGGTGAATATGAAATAACTGA 175382 Query 140029 TATTAA 140034 ||| || Sbjct 175381 TATAAA 175376 >seq10 Length=934921 Score = 125 bits (138), Expect = 1e-23 Identities = 396/605 (65%), Gaps = 18/605 (3%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 ||||| |||||| | ||||| || | || || || || |||| || || | | || Sbjct 693274 AAAGGTATTATTCTTGCAGGAGGTTTAGGTACTCGTTTATATCCTTTAACAAAAGTTTTT 693215 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 || ||||| ||||||||| | || |||||||||||||||| || ||||| | | | Sbjct 693214 TCTAAACATTTATTACCTATTTATAATAAACCAATGATTTATTACCCATTATCTGTTTTG 693155 Query 139559 ATCGAAGCT-GGTATAAACGAAATACTTATAATATCAACACCACAGGATAGAAATTCTTT 139617 || || | | || || |||||| | || ||| |||| | | ||| ||| || Sbjct 693154 AT-GACGATAGGAATTCGAGAAATATTGATTATAACAACGAAAGAAGATTATTATTTATT 693096 Query 139618 CGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCAAGA 139677 || || ||| ||| || || ||||||||| | | |||| | ||| | Sbjct 693095 TGAAAAATTATTAGAAAATGGAAATCAATTTGGTTGTCATTTTCAATATCAAATACAAAA 693036 Query 139678 AAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTAA 139737 |||| ||||| | || ||||| || || | | ||| ||||| || || || Sbjct 693035 TCAACCGAATGGAATTGCTCAAGCATTTATTCTTGCTGAGGAATTTCTACAAAATGACAA 692976 Query 139738 AGTAGCTCTGATTTTAGGTGACAAC--ATTTTC-CATG--CTTCTAATATAGATAGATTA 139792 ||| || ||||| | ||||| || ||||| |||| | ||| | | | | |||| Sbjct 692975 AGTTGCATTGATTCTTGGTGATAATCTATTTTATCATGAACATCTTTCACA-ACA-ATTA 692918 Query 139793 CTTATGGAAGCTAATATGTCTG---ATAAAAATACGATATTTGCATATCGTGTAAATGAT 139849 | |||| |||| || || | | |||||||| ||| || | |||| Sbjct 692917 C------AAGCATTTATGAATGTAGATGGAGCTTGTATATTTGCTTATGAAGTCACTGAT 692864 Query 139850 CCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGAA 139909 ||| | |||||| | ||||| | |||||| || || | | |||| || |||||| Sbjct 692863 CCTTGTCGTTATGGTATTATTGAACTTGATGAAAATAATCAACCGATTTCCATTGAAGAA 692804 Query 139910 AAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGAT 139969 ||||||| || || ||||||||| | ||| || | || || ||||||||| |||| ||| Sbjct 692803 AAACCTTGTAAACCAAAATCTAATAAAGCAATAACTGGTTTGTATTTCTATGATAATGAT 692744 Query 139970 GTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGAT 140029 || || || | || || || | ||| || | ||| || ||||| |||||| | ||| Sbjct 692743 GTGATTCAAATTGCAAAAACACTTCGACCATCCGATCGAGGTGAATATGAAATAACTGAT 692684 Query 140030 ATTAA 140034 || || Sbjct 692683 ATCAA 692679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701545096782240