Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq22089 551 2e-152 seq22794 540 3e-149 seq27943 295 2e-75 >seq22089 Length=356 Score = 551 bits (610), Expect = 2e-152 Identities = 314/320 (98%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 210 GCAGGCCAGCGAGGCAGATCTCCAGCCAGGAACTATTGAGTACGAACGCCATCGACTTAC 269 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 355 GCAGGCCAGCGAGACAGATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTAC 296 Query 270 GCGTGCGCAGGCCGACGCACAGGAACTGAAGAATGCCAGAGACTCCGCTGAAGTGGTGGA 329 ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 295 GCGTGCGCAGGCCGATGCACAGGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGA 236 Query 330 AACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGA 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 AACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGA 176 Query 390 CGGGCTCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTT 449 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175 CGGGATCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTT 116 Query 450 CCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACC 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 CCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACC 56 Query 510 GGGGTTGCTGAGTGAATATA 529 |||||||||||||||||||| Sbjct 55 GGGGTTGCTGAGTGAATATA 36 >seq22794 Length=343 Score = 540 bits (598), Expect = 3e-149 Identities = 326/344 (95%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 21951 CTGTTTTCAACAGTGATGAGGCATCGTGGCATCTCGTTGAAGACCATCGGGGTAAAACCG 22010 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| | Sbjct 1 CTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGG 60 Query 22011 TCTATGACGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAA 22070 | |||||||| || || || |||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTATGACGTRGCKTCMGGSGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAA 120 Query 22071 ATTTTACCTGGTTATCGCCGGGAGGGGAATATCAGAAGTGGAACGGCACAGCCTGGGTGA 22130 || |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct 121 ATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGA 180 Query 22131 AGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACaaaaaaaaGCC 22190 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 181 AGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAACAA-CC 239 Query 22191 TGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTG-CAGATCTGGAAATT 22249 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 240 TGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGACAGATCTGGAAATT 299 Query 22250 GCAACGGAGGAAGAAACCTCGTTGCTGGAAGCCTGGAAGAAGTA 22293 |||||||||||||||| ||||||||||||||| ||||| ||||| Sbjct 300 GCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTA 343 >seq27943 Length=261 Score = 295 bits (326), Expect = 2e-75 Identities = 219/256 (86%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 19858 GATGCCAGTGCATCAGCTGCTCAGGTCGCGGCCCTTGTGACTGATGCAACTGACTCAGCA 19917 |||||||| ||||||| | ||| || ||| || | ||||||| | ||||||||| Sbjct 256 GATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGCTGCGGACTCAGCA 197 Query 19918 CGCGCCGCCAGCACGTCCGCCGGACAGGCTGCATCGTCAGCTCAGGAAGCGTCCTCCGGC 19977 ||||| ||||||||||| ||||||||||| || ||||| |||||| |||||| ||| || Sbjct 196 CGCGCAGCCAGCACGTCAGCCGGACAGGCCGCGTCGTCGGCTCAGTCAGCGTCTTCCAGC 137 Query 19978 GCAGAAGCGGCATCAGCAAAGGCCACTGAAGCGGAAAAAAGTGCCGCAGCCGCAGAGTCC 20037 |||| | |||||||| |||||||||||||||| ||||||||| || || ||||||||| Sbjct 136 GCAGGAACGGCATCAACAAAGGCCACTGAAGCATCAAAAAGTGCTGCCGCTGCAGAGTCC 77 Query 20038 TCAAAAAACGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATGCTGCA 20097 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 76 TCAAAAAGCGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATGCTTCA 17 Query 20098 GCGTCACAACAATCAG 20113 ||||||| |||||||| Sbjct 16 GCGTCACTACAATCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151135062151500