Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq1298 1498 0.0 >seq1298 Length=11968 Score = 1498 bits (1660), Expect = 0.0 Identities = 859/878 (98%), Gaps = 0/878 (0%) Strand=Plus/Plus Query 28372 CCAAACGTCTCTTCAGGCCACTGGCTGGCGATAACTTTCCCCACAACGGAACAACTCTCA 28431 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 9965 CCAAACGTCTCTTCAGGCCACTGACTAGCGATAACTTTCCCCACAACGGAACAACTCTCA 10024 Query 28432 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCACTATCC 28491 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 10025 TTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCC 10084 Query 28492 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 28551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10085 CTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCACCT 10144 Query 28552 GGCTCAACAGCCTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTG 28611 |||||||||||||||||||||||||| ||||||||||| ||||||||||| || || ||| Sbjct 10145 GGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTG 10204 Query 28612 GATCCTGTTGGCGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 28671 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10205 GAGCCTGTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTG 10264 Query 28672 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTCA 28731 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 10265 GCTTTTTTGGTTGTGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTA 10324 Query 28732 GGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 28791 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10325 GGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTTCTAAGT 10384 Query 28792 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 28851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10385 GACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAAGGGCTA 10444 Query 28852 AATTCTTCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCATTTAAT 28911 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 10445 AATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCATTTAAT 10504 Query 28912 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTGTCTGCG 28971 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10505 GCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTGTCTGCG 10564 Query 28972 ACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTAAGGCGA 29031 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 10565 ACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTAAGGCGA 10624 Query 29032 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGTTAAATC 29091 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10625 CGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGTTAAATC 10684 Query 29092 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTAGCGGT 29151 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 10685 TATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCTGGCGGT 10744 Query 29152 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 29211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10745 GATAATGGTTGCATGTACTAAGGAGGTTGTATGGAACAACGCATAACCCTGAAAGATTAT 10804 Query 29212 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 29249 |||||||||||||||||||||||||||||||||||||| Sbjct 10805 GCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGATCT 10842 Score = 300 bits (332), Expect = 4e-77 Identities = 233/282 (83%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 26588 TCACCGCCCTGGTGAGTAGTGCGTCCTGCTGATGTGTTTAGTATCACCGCCAGTGGTATT 26647 ||||| | ||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct 8284 TCACCTTCATGGTGGTCAGTGCGTCCTGCTGATGTGCTCAGTATCACCGCCAGTGGTATT 8343 Query 26648 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTNNNNNNNN 26707 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8344 TATGTCAACACCGCCAGAGATAATTTATCACCGCAGATGGTTATCTGTATGTTTTTTATA 8403 Query 26708 NNNNNNNNNNNNNNNGCAGGGGTGTGTGGCTTGGGAGGTGATCGAGAGATCTGAATTGCG 26767 ||||||| | | | |||| |||||| |||||||||||||| Sbjct 8404 TGAATTTATTTTTT-GCAGGGGGGCATTGTTTGGTAGGTGA----GAGATCTGAATTGCT 8458 Query 26768 ATGTTTAGTGAGTTGTATCTATTAATTTTCAAATAAATACAATTGGTTATGTGTTTT-GG 26826 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct 8459 ATGTTTAGTGAGTTGTATCTATTTATTTTTCAATAAATACAATTGGTTATGTGTTTTGGG 8518 Query 26827 GGCGAACGTGAGGCAAAGAAAACCCGGCGCGGTGGCCGGGTT 26868 ||||| |||||||||||||||||||||||| | ||||||||| Sbjct 8519 GGCGATCGTGAGGCAAAGAAAACCCGGCGCTGAGGCCGGGTT 8560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126473658359160