Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq27943 372 9e-99 seq31060 345 1e-90 seq32719 284 3e-72 >seq27943 Length=261 Score = 372 bits (412), Expect = 9e-99 Identities = 239/261 (92%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 19483 CCAGCGATGCCGGCACATCTGCCCGTGAGGCGGCAACCCATGCAACCGATGCCGCAGGCT 19542 |||| |||||| ||||||| ||||||||||||||||||||||| | ||||| || | || Sbjct 261 CCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGCTGCGGACT 202 Query 19543 CAGCACGTGCCGCCAGCACGTCAGCCGGACAGGCTGCATCATCTGCTCAGTCAGCATCTT 19602 ||||||| || ||||||||||||||||||||||| || || || ||||||||||| |||| Sbjct 201 CAGCACGCGCAGCCAGCACGTCAGCCGGACAGGCCGCGTCGTCGGCTCAGTCAGCGTCTT 142 Query 19603 CCAGCGCAGGAACGGCATCAACAAAGGCCACTGAAGCATCAAAAAGTGCTGCCGCTGCAG 19662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 CCAGCGCAGGAACGGCATCAACAAAGGCCACTGAAGCATCAAAAAGTGCTGCCGCTGCAG 82 Query 19663 AGTCCTCAAAAAGCGCGGCAGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATG 19722 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 81 AGTCCTCAAAAAGCGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATG 22 Query 19723 CCGCAGCATCACAACTATCAG 19743 | |||| |||| || ||||| Sbjct 21 CTTCAGCGTCACTACAATCAG 1 >seq31060 Length=214 Score = 345 bits (382), Expect = 1e-90 Identities = 205/214 (96%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 35564 TTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTG 35623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 TTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTG 155 Query 35624 CAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTC 35683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 CAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTC 95 Query 35684 TGGCGCGTCGTGAGCAGTTTTTACGGAAAAGCAGCAAGCGCGCTGTATCGGGTGATGAGT 35743 ||||||||||||| | || ||||||||||||||| ||||| |||| ||| ||||| |||| Sbjct 94 TGGCGCGTCGTGAACGGTGTTTACGGAAAAGCAGTAAGCGGGCTGCATCAGGTGAAGAGT 35 Query 35744 GGTATCTGTCAGGGAATTACGTGGGGGCTTAATG 35777 ||||||| |||||||||||||||||||||||||| Sbjct 34 GGTATCTCTCAGGGAATTACGTGGGGGCTTAATG 1 >seq32719 Length=185 Score = 284 bits (314), Expect = 3e-72 Identities = 174/185 (94%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 38793 CAGGGTGGAATGGGAACAAAAGCGCATGACCTTTTTGTGTTGCCTTTGTGCAGAAAGCAT 38852 ||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct 1 CAGGGCGGAATGGGAACAAAAGCACATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCAT 60 Query 38853 CACGACGAGCTGCATGCGGATACCGTGGCATTTGAAGAGAAGTATGGCTCCCAGCTGGAG 38912 ||| ||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||| Sbjct 61 CACAACGAGCTGCATACGGATACAGTGGCATTTGAAGATAAGTATGGCTCCCAACTGGAG 120 Query 38913 CTGATATTTCGTTTTATCGATCGTGCGCTGGCAATTGGCGTATTGGCGTAAGTGGAGAAC 38972 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct 121 CTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTGGCGTAAGTGGAGAAC 180 Query 38973 GAGCA 38977 ||||| Sbjct 181 GAGCA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142249280084688